Variant report

Variant rs369544782
Chromosome Location chr2:11648454-11648455
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11639600-11655000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr2:11641400-11651600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:11641400-11653200 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr2:11641600-11653800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:11643400-11651200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:11644000-11651800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr2:11645200-11651800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr2:11646200-11648600 Enhancers Fetal Muscle Trunk muscle
9 chr2:11646200-11648800 Enhancers Brain Cingulate Gyrus brain
10 chr2:11646200-11648800 Enhancers Fetal Muscle Leg muscle
11 chr2:11646200-11649000 Enhancers Cortex derived primary cultured neurospheres brain
12 chr2:11646200-11649000 Enhancers Brain Inferior Temporal Lobe brain
13 chr2:11646400-11648800 Enhancers Brain Anterior Caudate brain
14 chr2:11646400-11648800 Enhancers Brain Substantia Nigra brain
15 chr2:11646400-11651600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:11646400-11653800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr2:11646600-11648800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
18 chr2:11646600-11649000 Enhancers Liver Liver
19 chr2:11647000-11648600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr2:11647000-11664400 Weak transcription Right Ventricle heart
21 chr2:11647000-11665800 Weak transcription Right Atrium heart
22 chr2:11647400-11648800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr2:11647400-11648800 Enhancers Fetal Stomach stomach
24 chr2:11647400-11651000 Genic enhancers HepG2 liver
25 chr2:11647600-11648800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr2:11647800-11648600 Enhancers Duodenum Mucosa Duodenum
27 chr2:11647800-11648600 Enhancers Fetal Intestine Small intestine
28 chr2:11647800-11648600 Enhancers Stomach Smooth Muscle stomach
29 chr2:11647800-11648800 Enhancers Colon Smooth Muscle Colon
30 chr2:11647800-11648800 Enhancers Fetal Lung lung
31 chr2:11647800-11649400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:11648000-11651400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr2:11648200-11648600 Enhancers Stomach Mucosa stomach
34 chr2:11648200-11650600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr2:11648400-11648600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:11648400-11648600 Enhancers Brain Hippocampus Middle brain
37 chr2:11648400-11648600 Enhancers Fetal Adrenal Gland Adrenal Gland
38 chr2:11648400-11648800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr2:11648400-11648800 Flanking Active TSS Brain Angular Gyrus brain
40 chr2:11648400-11648800 Enhancers Left Ventricle heart
41 chr2:11648400-11648800 Flanking Active TSS Ovary ovary
42 chr2:11648400-11648800 Bivalent Enhancer NH-A brain
43 chr2:11648400-11653600 Weak transcription Brain Germinal Matrix brain

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