Variant report

Variant	rs369589269
Chromosome Location	chr7:107033374-107033375
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:107027220..107028831-chr7:107032404..107035234,2	MCF-7	breast:
2	chr7:107026679..107030350-chr7:107031871..107033708,4	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv888939	chr7:106849393-107045700	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv1825788	chr7:106897237-107136320	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
4	nsv1024793	chr7:106900877-107170312	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
5	nsv608073	chr7:106960515-107063686	Strong transcription ZNF genes & repeats Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
6	esv1832266	chr7:106961882-107136320	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
7	nsv1033979	chr7:107003734-107877761	Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
8	nsv1019963	chr7:107033342-107188641	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
9	nsv539052	chr7:107033342-107188641	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:107001400-107037600	Weak transcription	Spleen	Spleen
2	chr7:107001400-107053600	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr7:107003600-107045000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr7:107003800-107038800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr7:107003800-107048400	Weak transcription	Dnd41	blood
6	chr7:107003800-107050200	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr7:107008400-107048200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr7:107013200-107038600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:107022200-107053000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr7:107024600-107038200	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr7:107024600-107045000	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr7:107025000-107038800	Weak transcription	Lung	lung
13	chr7:107025000-107039800	Weak transcription	Fetal Intestine Small	intestine
14	chr7:107025800-107039600	Weak transcription	Primary T cells from cord blood	blood
15	chr7:107027400-107035000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr7:107027400-107045800	Weak transcription	Right Atrium	heart
17	chr7:107027400-107053400	Weak transcription	Gastric	stomach
18	chr7:107027800-107047200	Weak transcription	Primary hematopoietic stem cells	blood
19	chr7:107027800-107050200	Weak transcription	Primary B cells from peripheral blood	blood
20	chr7:107027800-107086800	Weak transcription	Aorta	Aorta
21	chr7:107028000-107038800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr7:107028000-107038800	Weak transcription	Psoas Muscle	Psoas
23	chr7:107028000-107044800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr7:107028000-107052800	Weak transcription	Fetal Muscle Leg	muscle
25	chr7:107028000-107054400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr7:107028200-107039800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr7:107028200-107053000	Weak transcription	Fetal Stomach	stomach
28	chr7:107028200-107082400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr7:107028200-107103800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr7:107028800-107033400	Weak transcription	NHDF-Ad	bronchial
31	chr7:107028800-107033600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr7:107028800-107035800	Weak transcription	HUVEC	blood vessel
33	chr7:107028800-107053000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr7:107028800-107053200	Weak transcription	K562	blood
35	chr7:107029000-107034800	Weak transcription	Osteobl	bone
36	chr7:107029000-107035600	Weak transcription	NHLF	lung
37	chr7:107029400-107039800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr7:107029400-107050400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr7:107030200-107049000	Weak transcription	Right Ventricle	heart
40	chr7:107031600-107069600	Weak transcription	Fetal Kidney	kidney
41	chr7:107031800-107037400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr7:107031800-107050200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr7:107032000-107037600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr7:107032000-107050200	Weak transcription	Fetal Intestine Large	intestine
45	chr7:107032200-107040600	Weak transcription	Fetal Thymus	thymus
46	chr7:107032200-107045200	Weak transcription	HepG2	liver
47	chr7:107032400-107068000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr7:107032600-107034600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr7:107033000-107034000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr7:107033200-107033600	Enhancers	Adipose Nuclei	Adipose

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