Variant report

Variant	rs369672224
Chromosome Location	chr9:108536268-108536269
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:108530827..108532419-chr9:108534650..108537088,2	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893693	chr9:108427062-108683134	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv615116	chr9:108468129-108546438	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv893694	chr9:108486533-108854018	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
4	nsv615117	chr9:108534505-108536811	Strong transcription Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
5	nsv615118	chr9:108535272-108537072	ZNF genes & repeats Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
6	nsv615119	chr9:108535272-108537374	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
7	esv1829675	chr9:108535272-108538044	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
8	esv1837202	chr9:108535272-108538044	ZNF genes & repeats Weak transcription Enhancers Strong transcription	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
9	esv1798719	chr9:108535272-108546438	Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
10	nsv615120	chr9:108535330-108537702	Strong transcription Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	n/a
11	nsv1041073	chr9:108535813-108731343	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
12	esv20657	chr9:108536106-108538162	Strong transcription Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
13	nsv508558	chr9:108536115-108611087	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	n/a
14	nsv615121	chr9:108536172-108537702	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
15	esv1831948	chr9:108536180-108538044	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
16	esv1832798	chr9:108536180-108538044	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
17	nsv615122	chr9:108536207-108537072	Weak transcription ZNF genes & repeats Enhancers Strong transcription	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
18	nsv615123	chr9:108536207-108537374	Enhancers Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
19	nsv615124	chr9:108536207-108537526	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
20	nsv615125	chr9:108536207-108537826	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a
21	nsv615126	chr9:108536207-108538044	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	n/a

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:108514000-108540000	Weak transcription	HSMMtube	muscle
2	chr9:108515200-108545000	Weak transcription	K562	blood
3	chr9:108515200-108560600	Weak transcription	Ovary	ovary
4	chr9:108515400-108536800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr9:108515600-108538600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr9:108517800-108538400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:108520600-108546400	Weak transcription	Fetal Intestine Small	intestine
8	chr9:108521000-108538400	Weak transcription	Primary B cells from cord blood	blood
9	chr9:108530400-108552600	Weak transcription	Pancreas	Pancrea
10	chr9:108533000-108537000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr9:108534400-108538400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr9:108534400-108538400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr9:108534400-108539600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr9:108534600-108538400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr9:108534800-108538600	Weak transcription	Fetal Heart	heart
16	chr9:108535000-108540800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr9:108535200-108536600	Strong transcription	Primary hematopoietic stem cells	blood
18	chr9:108535800-108538600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr9:108536000-108539200	Weak transcription	Monocytes-CD14+_RO01746	blood
20	chr9:108536200-108536400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr9:108536200-108536400	ZNF genes & repeats	Aorta	Aorta
22	chr9:108536200-108536600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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