The 2.0 version of rSNPBase

Variant report

Variant rs370136463
Chromosome Location chr2:178216460-178216461
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178197200-178216800 Weak transcription Primary T cells from cord blood blood
2 chr2:178197200-178217600 Weak transcription Primary B cells from cord blood blood
3 chr2:178197600-178217200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr2:178202200-178217400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:178203200-178217800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr2:178203400-178217000 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:178203400-178244400 Weak transcription HSMM muscle
8 chr2:178203800-178221600 Weak transcription A549 lung
9 chr2:178210600-178218000 Enhancers HepG2 liver
10 chr2:178211800-178217400 Enhancers Primary hematopoietic stem cells short term culture blood
11 chr2:178212000-178224400 Weak transcription Fetal Heart heart
12 chr2:178212600-178218000 Enhancers Colon Smooth Muscle Colon
13 chr2:178213000-178217400 Enhancers Primary neutrophils fromperipheralblood blood
14 chr2:178213400-178217400 Enhancers Primary hematopoietic stem cells blood
15 chr2:178213400-178217400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:178213600-178217200 Enhancers Esophagus oesophagus
17 chr2:178213600-178218400 Enhancers Primary monocytes fromperipheralblood blood
18 chr2:178213800-178216600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:178213800-178217400 Weak transcription Fetal Kidney kidney
20 chr2:178214000-178216600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:178214200-178220400 Weak transcription Brain Substantia Nigra brain
22 chr2:178214400-178216600 Weak transcription Rectal Smooth Muscle rectum
23 chr2:178214400-178216600 Enhancers Monocytes-CD14+_RO01746 blood
24 chr2:178214400-178219800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr2:178214400-178220400 Weak transcription Brain Angular Gyrus brain
26 chr2:178214400-178228200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:178214600-178217000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr2:178214800-178220400 Weak transcription Brain Hippocampus Middle brain
29 chr2:178214800-178221400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr2:178215000-178218400 Enhancers Adipose Nuclei Adipose
31 chr2:178215200-178216600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:178215200-178217600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:178215200-178217800 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr2:178215200-178218200 Enhancers Fetal Stomach stomach
35 chr2:178215400-178216600 Weak transcription Placenta Placenta
36 chr2:178215400-178216800 Weak transcription Lung lung
37 chr2:178215400-178220200 Weak transcription Brain Inferior Temporal Lobe brain
38 chr2:178215600-178217400 Enhancers NHEK skin
39 chr2:178215800-178216800 Enhancers Ovary ovary
40 chr2:178215800-178217200 Enhancers Stomach Smooth Muscle stomach
41 chr2:178215800-178217400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr2:178216000-178217200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:178216000-178217600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:178216000-178217600 Enhancers Rectal Mucosa Donor 29 rectum
45 chr2:178216000-178218000 Enhancers HMEC breast
46 chr2:178216200-178217200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr2:178216400-178216600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr2:178216400-178216600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr2:178216400-178216600 Enhancers Right Atrium heart
50 chr2:178216400-178216800 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015