Variant report

Variant	rs370441337
Chromosome Location	chr3:43057672-43057673
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460522	chr3:42967597-43175207	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv590149	chr3:42967597-43175207	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv460523	chr3:43025986-43063406	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv590150	chr3:43025986-43063406	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv432417	chr3:43045796-43098296	ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	esv18139	chr3:43053229-43059805	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3395372	chr3:43056498-43059296	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv3372043	chr3:43056907-43059152	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43053000-43057800	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
2	chr3:43053200-43060600	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
3	chr3:43053400-43059400	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
4	chr3:43053600-43073200	Weak transcription	Right Atrium	heart
5	chr3:43053800-43058600	ZNF genes & repeats	Fetal Thymus	thymus
6	chr3:43054000-43058200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
7	chr3:43054200-43058800	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
8	chr3:43054200-43058800	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
9	chr3:43054200-43059000	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
10	chr3:43054400-43058400	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
11	chr3:43054400-43058600	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
12	chr3:43054400-43058800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 2	blood
13	chr3:43054400-43058800	ZNF genes & repeats	Dnd41	blood
14	chr3:43054600-43061600	Weak transcription	Stomach Smooth Muscle	stomach
15	chr3:43054800-43058200	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr3:43057000-43058000	ZNF genes & repeats	Spleen	Spleen
17	chr3:43057400-43058000	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr3:43057600-43058400	Enhancers	Primary T cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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