Variant report

Variant	rs370468914
Chromosome Location	chr7:127776516-127776517
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:127770664..127774572-chr7:127774612..127778986,4	K562	blood:
2	chr7:127775242..127776690-chr7:127849539..127850451,13	K562	blood:
3	chr7:127775454..127776695-chr7:127847926..127849197,18	MCF-7	breast:
4	chr7:127775629..127777562-chr7:127847751..127849671,2	MCF-7	breast:
5	chr7:127776325..127778425-chr7:127848466..127850117,2	K562	blood:
6	chr7:127290259..127292033-chr7:127774841..127777045,2	K562	blood:
7	chr7:127774436..127777299-chr7:127779150..127782660,3	K562	blood:
8	chr7:127770457..127772622-chr7:127774413..127777391,3	MCF-7	breast:
9	chr7:127775486..127776605-chr7:127849515..127850418,16	MCF-7	breast:
10	chr7:127775768..127776602-chr7:127839565..127840318,2	MCF-7	breast:
11	chr7:127775695..127776672-chr7:127838301..127838940,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000207705	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022385	chr7:127246656-127971194	Weak transcription Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv539120	chr7:127246656-127971194	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	esv3377887	chr7:127776026-127776644	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127774600-127776600	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr7:127774600-127776800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
3	chr7:127774800-127776600	Bivalent Enhancer	Fetal Heart	heart
4	chr7:127774800-127776800	Bivalent/Poised TSS	Fetal Brain Female	brain
5	chr7:127775200-127776600	Flanking Active TSS	Brain Anterior Caudate	brain
6	chr7:127775200-127776800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
7	chr7:127775200-127776800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
8	chr7:127775200-127776800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr7:127775400-127776600	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr7:127775400-127776600	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
11	chr7:127775400-127776600	Flanking Active TSS	Primary B cells from cord blood	blood
12	chr7:127775400-127776600	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
13	chr7:127775400-127776800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
14	chr7:127775400-127776800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr7:127775600-127776600	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr7:127775600-127776600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr7:127775600-127776600	Active TSS	H9 Cell Line	embryonic stem cell
18	chr7:127775600-127776600	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
19	chr7:127775600-127776600	Enhancers	Lung	lung
20	chr7:127775600-127776600	Bivalent/Poised TSS	A549	lung
21	chr7:127775600-127776600	Flanking Bivalent TSS/Enh	Dnd41	blood
22	chr7:127775600-127776600	Bivalent/Poised TSS	HSMMtube	muscle
23	chr7:127775600-127776800	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr7:127775600-127776800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
25	chr7:127775600-127776800	Active TSS	Brain Angular Gyrus	brain
26	chr7:127775800-127776600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr7:127775800-127776600	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
28	chr7:127775800-127776600	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr7:127775800-127776600	Bivalent/Poised TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr7:127775800-127776600	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
31	chr7:127775800-127776600	Active TSS	Ovary	ovary
32	chr7:127775800-127776600	Bivalent/Poised TSS	Psoas Muscle	Psoas
33	chr7:127775800-127776600	Bivalent/Poised TSS	GM12878-XiMat	blood
34	chr7:127775800-127776600	Active TSS	HSMM	muscle
35	chr7:127775800-127776800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr7:127775800-127776800	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr7:127775800-127776800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
38	chr7:127775800-127776800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
39	chr7:127775800-127776800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr7:127775800-127776800	Active TSS	Brain Cingulate Gyrus	brain
41	chr7:127775800-127776800	Bivalent/Poised TSS	Brain Germinal Matrix	brain
42	chr7:127775800-127776800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
43	chr7:127775800-127776800	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
44	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
46	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
47	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
48	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
49	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr7:127776000-127776600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin

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