Variant report

Variant	rs370688638
Chromosome Location	chr11:8102144-8102145
allele	-/ATG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr11:8101827-8108407	SK-N-SH	brain:	n/a	chr11:8104003-8104018 chr11:8103574-8103583
2	KAP1	chr11:8101930-8102486	HEK293	kidney:	n/a	n/a
3	REST	chr11:8101910-8103001	H1-neurons	neurons:	n/a	chr11:8102894-8102904 chr11:8102887-8102900
4	MAZ	chr11:8102102-8104439	IMR90	lung:	n/a	chr11:8104328-8104341 chr11:8104330-8104340 chr11:8104050-8104059 chr11:8104330-8104339 chr11:8104331-8104338 chr11:8104330-8104339 chr11:8103843-8103853 chr11:8104329-8104340 chr11:8104329-8104339 chr11:8104129-8104140
5	MAX	chr11:8102141-8103803	A549	lung:	n/a	n/a
6	RCOR1	chr11:8101856-8102735	IMR90	lung:	n/a	n/a

Variant related genes	Relation type
TUB	TF binding region

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052808	chr11:8011647-8129191	Bivalent Enhancer Strong transcription Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
2	esv1829170	chr11:8068594-8216369	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv428249	chr11:8068594-8216369	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
4	esv3421936	chr11:8101601-8104149	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3412612	chr11:8102026-8104049	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8100400-8102200	Weak transcription	Pancreas	Pancrea
2	chr11:8101600-8102200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
3	chr11:8101600-8102200	Bivalent Enhancer	HepG2	liver
4	chr11:8101800-8102200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr11:8101800-8102200	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
6	chr11:8101800-8102200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
7	chr11:8101800-8102200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr11:8101800-8102200	Flanking Active TSS	Brain Cingulate Gyrus	brain
9	chr11:8101800-8102200	Enhancers	Brain Inferior Temporal Lobe	brain
10	chr11:8101800-8102200	Bivalent Enhancer	Fetal Muscle Leg	muscle
11	chr11:8101800-8102200	Enhancers	Ovary	ovary
12	chr11:8101800-8103400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
13	chr11:8102000-8102200	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
14	chr11:8102000-8102200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:8102000-8102200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
16	chr11:8102000-8102200	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
17	chr11:8102000-8102200	Bivalent/Poised TSS	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr11:8102000-8102200	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
19	chr11:8102000-8102200	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
20	chr11:8102000-8102200	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr11:8102000-8102200	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr11:8102000-8102200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr11:8102000-8102200	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr11:8102000-8102200	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr11:8102000-8102200	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr11:8102000-8102200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr11:8102000-8102200	Enhancers	Adipose Nuclei	Adipose
28	chr11:8102000-8102200	Bivalent Enhancer	Brain Hippocampus Middle	brain
29	chr11:8102000-8102200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
30	chr11:8102000-8102200	Bivalent Enhancer	Duodenum Smooth Muscle	Duodenum
31	chr11:8102000-8102200	Bivalent Enhancer	Fetal Intestine Small	intestine
32	chr11:8102000-8102200	Flanking Bivalent TSS/Enh	Fetal Lung	lung
33	chr11:8102000-8102200	Bivalent Enhancer	Placenta	Placenta
34	chr11:8102000-8102200	Bivalent Enhancer	Fetal Stomach	stomach
35	chr11:8102000-8102200	Enhancers	Right Ventricle	heart
36	chr11:8102000-8102200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
37	chr11:8102000-8102200	Enhancers	A549	lung
38	chr11:8102000-8102400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
39	chr11:8102000-8102600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr11:8102000-8102600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr11:8102000-8102600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr11:8102000-8102600	Flanking Active TSS	Fetal Brain Male	brain
43	chr11:8102000-8102600	Enhancers	Fetal Heart	heart
44	chr11:8102000-8102600	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
45	chr11:8102000-8102600	Flanking Active TSS	Stomach Smooth Muscle	stomach
46	chr11:8102000-8103200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr11:8102000-8103200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
48	chr11:8102000-8103200	Active TSS	Brain Anterior Caudate	brain
49	chr11:8102000-8103200	Active TSS	Colon Smooth Muscle	Colon
50	chr11:8102000-8103200	Active TSS	Osteobl	bone

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