The 2.0 version of rSNPBase

Variant report

Variant rs370814807
Chromosome Location chr6:44529088-44529089
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:44523000-44531000 Weak transcription Ovary ovary
2 chr6:44524000-44531000 Weak transcription Gastric stomach
3 chr6:44525000-44529200 Enhancers Pancreas Pancrea
4 chr6:44526600-44531000 Weak transcription Right Atrium heart
5 chr6:44527600-44535400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:44528000-44529600 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr6:44528000-44532600 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr6:44528400-44529400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:44528600-44529200 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr6:44528600-44529200 Bivalent Enhancer Fetal Stomach stomach
11 chr6:44528600-44529200 Bivalent Enhancer Dnd41 blood
12 chr6:44528600-44529400 Enhancers HUES64 Cell Line embryonic stem cell
13 chr6:44528600-44529400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr6:44528600-44529400 Bivalent Enhancer Fetal Muscle Trunk muscle
15 chr6:44528600-44529800 Enhancers Primary hematopoietic stem cells blood
16 chr6:44528600-44529800 Enhancers Fetal Lung lung
17 chr6:44528600-44530200 Enhancers Fetal Thymus thymus
18 chr6:44528800-44529200 Bivalent Enhancer Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr6:44528800-44529200 Enhancers Breast Myoepithelial Primary Cells Breast
20 chr6:44528800-44529200 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
21 chr6:44528800-44529200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
22 chr6:44528800-44529200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr6:44528800-44529200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr6:44528800-44529400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr6:44528800-44529400 Active TSS Primary T cells from cord blood blood
26 chr6:44528800-44529400 Bivalent Enhancer Primary T cells fromperipheralblood blood
27 chr6:44528800-44529400 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
28 chr6:44528800-44529400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr6:44528800-44529400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr6:44528800-44529600 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr6:44528800-44529800 Bivalent Enhancer Adipose Nuclei Adipose
32 chr6:44528800-44530000 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr6:44529000-44529200 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:44529000-44529200 Flanking Active TSS Primary monocytes fromperipheralblood blood
35 chr6:44529000-44529200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
36 chr6:44529000-44529200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:44529000-44529200 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
38 chr6:44529000-44529200 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
39 chr6:44529000-44529200 Enhancers Brain Substantia Nigra brain
40 chr6:44529000-44529200 Bivalent/Poised TSS Colon Smooth Muscle Colon
41 chr6:44529000-44529200 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
42 chr6:44529000-44529200 Bivalent Enhancer Fetal Brain Male brain
43 chr6:44529000-44529200 Flanking Active TSS Psoas Muscle Psoas
44 chr6:44529000-44529200 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
45 chr6:44529000-44529200 Bivalent Enhancer Stomach Smooth Muscle stomach
46 chr6:44529000-44529200 Flanking Bivalent TSS/Enh Thymus Thymus
47 chr6:44529000-44529200 Enhancers Spleen Spleen
48 chr6:44529000-44529200 Flanking Bivalent TSS/Enh NHEK skin
49 chr6:44529000-44529400 Bivalent/Poised TSS Brain Hippocampus Middle brain
50 chr6:44529000-44529400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015