Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:112650703..112654351-chr1:112656612..112659393,3	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs2819209	0.83[AMR][1000 genomes]
rs35143807	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs367572	0.83[AMR][1000 genomes]
rs373157	0.83[AMR][1000 genomes]
rs374902	0.80[AMR][1000 genomes]
rs374958	0.83[AMR][1000 genomes]
rs430680	0.83[AMR][1000 genomes]
rs432663	0.83[AMR][1000 genomes]
rs434800	0.83[AMR][1000 genomes]
rs436173	0.83[AMR][1000 genomes]
rs441740	0.83[AMR][1000 genomes]
rs443625	0.83[AMR][1000 genomes]
rs455228	0.83[AMR][1000 genomes]
rs460443	0.83[AMR][1000 genomes]
rs461311	0.80[AMR][1000 genomes]
rs461553	0.83[AMR][1000 genomes]
rs462936	0.80[AMR][1000 genomes]
rs463983	0.83[AMR][1000 genomes]
rs464357	0.80[AMR][1000 genomes]
rs464819	0.83[AMR][1000 genomes]
rs466206	0.83[AMR][1000 genomes]
rs609882	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831048	chr1:112459697-112680279	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	nsv831059	chr1:112569062-112724725	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv831070	chr1:112594658-112792539	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1000467	chr1:112641655-112659834	Weak transcription Active TSS Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:112652400-112653400	Enhancers	Fetal Lung	lung
2	chr1:112652600-112653400	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr1:112652800-112653400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr1:112653000-112654400	Weak transcription	Stomach Mucosa	stomach

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