Variant report

Variant	rs371361545
Chromosome Location	chr11:72152129-72152130
allele	-/TA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832206	chr11:72006573-72176017	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	esv1794740	chr11:72021720-72332931	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
3	esv2762916	chr11:72147875-72160112	Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv522492	chr11:72150828-72154529	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72145600-72152600	Weak transcription	Right Atrium	heart
2	chr11:72150200-72152200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:72150200-72153000	Enhancers	Adipose Nuclei	Adipose
4	chr11:72150400-72154800	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr11:72150600-72152400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr11:72150800-72158000	Weak transcription	Hela-S3	cervix
7	chr11:72151200-72152600	Enhancers	Placenta	Placenta
8	chr11:72151400-72153000	Enhancers	Primary B cells from cord blood	blood
9	chr11:72151400-72153200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
10	chr11:72151600-72152400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr11:72151800-72153000	Enhancers	Primary T cells fromperipheralblood	blood
12	chr11:72152000-72152800	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr11:72152000-72152800	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr11:72152000-72153000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr11:72152000-72153000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr11:72152000-72153000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
17	chr11:72152000-72153200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr11:72152000-72154400	Enhancers	Primary neutrophils fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links