Variant report

Variant	rs371368948
Chromosome Location	chr9:86226979-86226980
allele	-/GTGT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893512	chr9:86022215-86323309	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	nsv516587	chr9:86226119-86255765	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
3	nsv411849	chr9:86226980-86226981	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86216200-86237400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:86226200-86227000	Enhancers	Primary hematopoietic stem cells	blood
3	chr9:86226200-86227000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:86226400-86227000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr9:86226400-86227000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr9:86226400-86227000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr9:86226400-86227400	Flanking Active TSS	Liver	Liver
8	chr9:86226600-86227000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr9:86226600-86227000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr9:86226600-86227000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr9:86226600-86227000	Enhancers	Fetal Heart	heart
12	chr9:86226600-86227000	Flanking Active TSS	Hela-S3	cervix
13	chr9:86226600-86227000	Enhancers	HepG2	liver
14	chr9:86226800-86227000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr9:86226800-86227000	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr9:86226800-86227000	Bivalent Enhancer	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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