Variant report

Variant	rs371435941
Chromosome Location	chrX:76704957-76704958
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chrX:76704946-76705041	HUVEC	blood vessel:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:76704759..76707077-chrX:76710548..76712188,2	MCF-7	breast:

Variant related genes	Relation type
FGF16	TF binding region

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531129	chrX:76703995-77038914	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:76703600-76705400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chrX:76703800-76705400	Flanking Active TSS	HUVEC	blood vessel
3	chrX:76703800-76706200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chrX:76704000-76705000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
5	chrX:76704200-76705000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
6	chrX:76704200-76705600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chrX:76704200-76705800	Active TSS	Fetal Muscle Trunk	muscle
8	chrX:76704400-76705000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
9	chrX:76704400-76705200	Enhancers	Fetal Heart	heart
10	chrX:76704600-76705000	Active TSS	HUES48 Cell Line	embryonic stem cell
11	chrX:76704600-76705000	Bivalent Enhancer	Adipose Nuclei	Adipose
12	chrX:76704600-76705200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chrX:76704600-76706000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chrX:76704800-76705000	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
15	chrX:76704800-76705000	Enhancers	Primary hematopoietic stem cells	blood
16	chrX:76704800-76705000	Active TSS	Fetal Muscle Leg	muscle
17	chrX:76704800-76705400	Weak transcription	NH-A	brain
18	chrX:76704800-76705600	Enhancers	iPS-15b Cell Line	embryonic stem cell
19	chrX:76704800-76705600	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chrX:76704800-76705800	Weak transcription	Left Ventricle	heart
21	chrX:76704800-76709000	Weak transcription	Right Atrium	heart

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