Variant report

Variant	rs371468852
Chromosome Location	chrX:64520181-64520182
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817451	chrX:64049597-64916072	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv916714	chrX:64178342-64589821	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv491830	chrX:64263556-64525424	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv3399105	chrX:64505980-64586980	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:64519400-64520800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chrX:64519600-64520200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chrX:64519600-64520600	Enhancers	Dnd41	blood
4	chrX:64519800-64520200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
5	chrX:64519800-64520200	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
6	chrX:64519800-64520400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chrX:64519800-64520400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
8	chrX:64519800-64520400	Active TSS	iPS-20b Cell Line	embryonic stem cell
9	chrX:64520000-64520400	Active TSS	HUES6 Cell Line	embryonic stem cell
10	chrX:64520000-64520600	Active TSS	ES-I3 Cell Line	embryonic stem cell
11	chrX:64520000-64520600	ZNF genes & repeats	Adipose Nuclei	Adipose
12	chrX:64520000-64520600	Enhancers	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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