| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv533980 |
chr3:23445901-24311972 |
ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
64 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv834638 |
chr3:23963860-24117191 |
Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
19 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv834639 |
chr3:24037113-24233925 |
Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv536523 |
chr3:24041166-24076110 |
Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1004037 |
chr3:24064777-24143719 |
Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
