Variant report

Variant	rs371662717
Chromosome Location	chr5:57558083-57558084
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3489100	chr5:57545689-57669673	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3489101	chr5:57545689-57669673	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv2762520	chr5:57557770-57578659	Enhancers Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57556200-57558800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr5:57556400-57561200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr5:57556600-57558200	Enhancers	A549	lung
4	chr5:57556800-57558400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr5:57557000-57558200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr5:57557000-57558400	Enhancers	Osteobl	bone
7	chr5:57557000-57559000	Enhancers	NHDF-Ad	bronchial
8	chr5:57557200-57558200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr5:57557200-57558600	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr5:57557200-57558800	Enhancers	NHLF	lung
11	chr5:57557400-57558200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr5:57557400-57558400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr5:57557400-57558600	Enhancers	Aorta	Aorta
14	chr5:57557400-57558800	Enhancers	HSMMtube	muscle
15	chr5:57557400-57559000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr5:57557600-57558200	Enhancers	Adipose Nuclei	Adipose
17	chr5:57557800-57560200	Weak transcription	Right Atrium	heart
18	chr5:57557800-57562200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr5:57557800-57562200	Weak transcription	HUVEC	blood vessel

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links