Variant report

Variant	rs371749607
Chromosome Location	chr9:78752571-78752572
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831627	chr9:78651134-78817669	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv869152	chr9:78742197-79583399	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
3	nsv982623	chr9:78752088-78754899	Enhancers Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:78688000-78774000	Weak transcription	Left Ventricle	heart
2	chr9:78723800-78752600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr9:78724000-78767000	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr9:78725400-78766400	Weak transcription	Thymus	Thymus
5	chr9:78730200-78755000	Weak transcription	Aorta	Aorta
6	chr9:78745200-78753000	Weak transcription	Fetal Thymus	thymus
7	chr9:78745400-78758800	Weak transcription	Primary T cells from cord blood	blood
8	chr9:78748400-78769200	Weak transcription	Duodenum Mucosa	Duodenum
9	chr9:78750400-78752600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr9:78750600-78753000	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr9:78750600-78753600	Enhancers	Ovary	ovary
12	chr9:78750800-78753200	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr9:78751200-78752600	Enhancers	Muscle Satellite Cultured Cells	--
14	chr9:78751200-78752800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr9:78751400-78752600	Strong transcription	Fetal Intestine Small	intestine
16	chr9:78751600-78752800	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr9:78751600-78773200	Weak transcription	Fetal Stomach	stomach
18	chr9:78751800-78752600	Enhancers	NHEK	skin
19	chr9:78751800-78752800	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr9:78751800-78752800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr9:78751800-78753000	Enhancers	HUVEC	blood vessel
22	chr9:78751800-78753600	Enhancers	NHLF	lung
23	chr9:78751800-78753800	Enhancers	Fetal Lung	lung
24	chr9:78752000-78753000	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr9:78752200-78754400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr9:78752200-78772000	Weak transcription	Fetal Intestine Large	intestine
27	chr9:78752400-78752800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr9:78752400-78752800	Weak transcription	Psoas Muscle	Psoas
29	chr9:78752400-78773400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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