Variant report

Variant	rs371764724
Chromosome Location	chr4:86788011-86788012
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830000	chr4:86745341-86909059	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv879519	chr4:86786204-86871282	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86750000-86809200	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:86776000-86790400	Weak transcription	Right Atrium	heart
3	chr4:86779800-86800200	Weak transcription	Primary B cells from cord blood	blood
4	chr4:86780400-86790800	Weak transcription	Gastric	stomach
5	chr4:86781800-86789000	Weak transcription	Small Intestine	intestine
6	chr4:86781800-86790400	Weak transcription	NH-A	brain
7	chr4:86782400-86788400	Weak transcription	Stomach Smooth Muscle	stomach
8	chr4:86782800-86791600	Weak transcription	Duodenum Mucosa	Duodenum
9	chr4:86783600-86788400	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr4:86784000-86790200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr4:86784200-86789400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr4:86787200-86788200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr4:86787200-86788400	Enhancers	HSMMtube	muscle
14	chr4:86787200-86788600	Enhancers	Fetal Kidney	kidney
15	chr4:86787200-86789400	Enhancers	Muscle Satellite Cultured Cells	--
16	chr4:86787400-86788200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr4:86787400-86788200	Enhancers	Fetal Muscle Leg	muscle
18	chr4:86787400-86788200	Flanking Active TSS	NHDF-Ad	bronchial
19	chr4:86787400-86788400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr4:86787400-86788600	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr4:86787600-86788400	Enhancers	Adipose Nuclei	Adipose
22	chr4:86787600-86788400	Enhancers	Fetal Stomach	stomach
23	chr4:86787600-86788600	Enhancers	Rectal Smooth Muscle	rectum
24	chr4:86787600-86788600	Enhancers	NHLF	lung
25	chr4:86787600-86788800	Enhancers	Colon Smooth Muscle	Colon
26	chr4:86787800-86788200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr4:86787800-86788400	Enhancers	HUES48 Cell Line	embryonic stem cell
28	chr4:86787800-86788400	Enhancers	Skeletal Muscle Male	skeletal muscle
29	chr4:86787800-86791200	Enhancers	HUVEC	blood vessel
30	chr4:86788000-86789200	Weak transcription	Duodenum Smooth Muscle	Duodenum
31	chr4:86788000-86789200	Weak transcription	Stomach Mucosa	stomach
32	chr4:86788000-86789200	Enhancers	Osteobl	bone
33	chr4:86788000-86790400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr4:86788000-86790400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr4:86788000-86792200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr4:86788000-86792600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr4:86788000-86793800	Weak transcription	Pancreas	Pancrea
38	chr4:86788000-86794200	Weak transcription	Psoas Muscle	Psoas
39	chr4:86788000-86795400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr4:86788000-86795400	Weak transcription	Skeletal Muscle Female	skeletal muscle
41	chr4:86788000-86797000	Weak transcription	Ovary	ovary
42	chr4:86788000-86804000	Weak transcription	Aorta	Aorta
43	chr4:86788000-86807400	Weak transcription	Left Ventricle	heart
44	chr4:86788000-86810800	Weak transcription	Primary B cells from peripheral blood	blood
45	chr4:86788000-86812400	Weak transcription	HSMM	muscle

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