Variant report

Variant	rs371780098
Chromosome Location	chr14:31381574-31381575
allele	-/AAT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564169	chr14:30819087-31541494	Strong transcription Genic enhancers ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv901581	chr14:30978745-31585289	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv832762	chr14:31238634-31414038	Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv564173	chr14:31358377-31400682	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv901584	chr14:31358377-31409010	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv564174	chr14:31365884-31400682	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
7	nsv564175	chr14:31365884-31409010	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
8	nsv564176	chr14:31365884-31413492	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
9	nsv901585	chr14:31365884-31433473	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
10	nsv901586	chr14:31365884-31465241	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
11	nsv564177	chr14:31381351-31425437	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31345000-31435400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr14:31345400-31382600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:31346600-31382600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr14:31347000-31384600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr14:31347000-31394800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr14:31355800-31414400	Weak transcription	Spleen	Spleen
7	chr14:31356200-31412800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr14:31358000-31428200	Weak transcription	Small Intestine	intestine
9	chr14:31360200-31435600	Weak transcription	Gastric	stomach
10	chr14:31360400-31381800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr14:31361600-31384400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr14:31361800-31394200	Weak transcription	Fetal Brain Male	brain
13	chr14:31362200-31414400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr14:31362400-31435400	Weak transcription	Colonic Mucosa	Colon
15	chr14:31362600-31382400	Strong transcription	Liver	Liver
16	chr14:31363000-31394400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr14:31363000-31430600	Weak transcription	Brain Angular Gyrus	brain
18	chr14:31363000-31435200	Weak transcription	Esophagus	oesophagus
19	chr14:31363400-31383000	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr14:31364400-31415400	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr14:31364800-31393200	Weak transcription	Brain Substantia Nigra	brain
22	chr14:31365800-31402200	Weak transcription	Thymus	Thymus
23	chr14:31365800-31414200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr14:31365800-31435600	Weak transcription	Right Ventricle	heart
25	chr14:31367000-31381600	Strong transcription	Primary monocytes fromperipheralblood	blood
26	chr14:31367600-31381600	Strong transcription	Monocytes-CD14+_RO01746	blood
27	chr14:31369800-31381800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
28	chr14:31370000-31381600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr14:31370000-31381800	Strong transcription	HUES48 Cell Line	embryonic stem cell
30	chr14:31370000-31393600	Weak transcription	Lung	lung
31	chr14:31370000-31414400	Weak transcription	Pancreas	Pancrea
32	chr14:31370400-31381600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr14:31370400-31381800	Strong transcription	HUES64 Cell Line	embryonic stem cell
34	chr14:31370600-31381600	Strong transcription	HSMM	muscle
35	chr14:31370600-31382000	Strong transcription	HUES6 Cell Line	embryonic stem cell
36	chr14:31370800-31381800	Strong transcription	Primary T helper cells fromperipheralblood	blood
37	chr14:31371000-31383000	Weak transcription	Brain Cingulate Gyrus	brain
38	chr14:31372400-31414400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr14:31372600-31381800	Strong transcription	Primary B cells from cord blood	blood
40	chr14:31372800-31381800	Strong transcription	Primary B cells from peripheral blood	blood
41	chr14:31373200-31381600	Strong transcription	Skeletal Muscle Female	skeletal muscle
42	chr14:31373200-31381800	Strong transcription	Rectal Mucosa Donor 29	rectum
43	chr14:31373200-31381800	Strong transcription	Rectal Mucosa Donor 31	rectum
44	chr14:31373400-31381800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr14:31373800-31384200	Strong transcription	HepG2	liver
46	chr14:31374600-31381600	Strong transcription	Primary T cells fromperipheralblood	blood
47	chr14:31374600-31381800	Strong transcription	Primary T helper cells PMA-I stimulated	--
48	chr14:31375000-31381800	Strong transcription	Stomach Smooth Muscle	stomach
49	chr14:31375600-31390000	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr14:31376200-31403000	Weak transcription	Hela-S3	cervix

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