Variant report

Variant	rs371954161
Chromosome Location	chrX:65294632-65294633
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:65241729..65244728-chrX:65293481..65295909,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3429625	chrX:64787230-65458721	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv995042	chrX:65121634-65953299	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
3	nsv916393	chrX:65269672-65521616	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv3350331	chrX:65287003-65495627	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:65293200-65296200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
2	chrX:65294000-65294800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
3	chrX:65294000-65295200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chrX:65294000-65295600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chrX:65294400-65294800	Enhancers	Placenta	Placenta
6	chrX:65294400-65295200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
7	chrX:65294400-65295400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
8	chrX:65294400-65295400	Enhancers	Fetal Thymus	thymus
9	chrX:65294600-65294800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
10	chrX:65294600-65294800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chrX:65294600-65294800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
12	chrX:65294600-65294800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
13	chrX:65294600-65294800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
14	chrX:65294600-65294800	Enhancers	GM12878-XiMat	blood
15	chrX:65294600-65295000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
16	chrX:65294600-65295000	Flanking Active TSS	Primary T cells from cord blood	blood
17	chrX:65294600-65295000	Flanking Active TSS	Primary hematopoietic stem cells	blood
18	chrX:65294600-65295000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
19	chrX:65294600-65295000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
20	chrX:65294600-65295200	Flanking Active TSS	Primary B cells from peripheral blood	blood
21	chrX:65294600-65295200	Flanking Active TSS	Primary T cells fromperipheralblood	blood
22	chrX:65294600-65295200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
23	chrX:65294600-65295200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chrX:65294600-65295200	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
25	chrX:65294600-65295200	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
26	chrX:65294600-65295200	Enhancers	K562	blood
27	chrX:65294600-65295400	Active TSS	Primary B cells from cord blood	blood
28	chrX:65294600-65295400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chrX:65294600-65295400	Active TSS	Duodenum Mucosa	Duodenum

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