Variant report

Variant	rs372039924
Chromosome Location	chr6:31464707-31464708
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:12)
CpG islands
(count:61)
Chromatin interactive
region (count:13)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:12 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:31464672-31464959	HepG2	liver:	n/a	n/a
2	POLR2A	chr6:31464512-31464847	GM12878	blood:	n/a	n/a
3	PBX3	chr6:31464686-31464844	GM12878	blood:	n/a	n/a
4	CTCF	chr6:31464600-31464750	GM12869	blood:	n/a	n/a
5	POLR2A	chr6:31464506-31466226	SK-N-MC	brain:	n/a	n/a
6	EBF1	chr6:31464660-31464944	GM12878	blood:	n/a	chr6:31464710-31464720 chr6:31464722-31464733 chr6:31464709-31464720
7	EBF1	chr6:31464612-31464772	GM12878	blood:	n/a	chr6:31464710-31464720 chr6:31464722-31464733 chr6:31464709-31464720
8	SIN3A	chr6:31464674-31464910	GM12878	blood:	n/a	chr6:31464824-31464837
9	CTCF	chr6:31464660-31464810	GM12875	blood:	n/a	n/a
10	POLR2A	chr6:31464563-31464886	GM12878	blood:	n/a	n/a
11	MXI1	chr6:31464622-31464973	GM12878	blood:	n/a	n/a
12	POLR2A	chr6:31464517-31466251	PANC-1	pancreas:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31464699-31464749	SK-N-SH_RA	brain:	n/a
2	chr6:31464699-31464749	NHBE	bronchial:	n/a
3	chr6:31464699-31464749	GM06990	blood:	n/a
4	chr6:31464699-31464749	PFSK-1	brain:	n/a
5	chr6:31464699-31464749	CMK	blood:	n/a
6	chr6:31464699-31464749	SKMC	muscle:	n/a
7	chr6:31464699-31464749	GM19239	blood:	n/a
8	chr6:31464699-31464749	HepG2	liver:	n/a
9	chr6:31464699-31464749	NB4	blood:	n/a
10	chr6:31464699-31464749	HEEpiC	esophagus:	n/a
11	chr6:31464699-31464749	HCM	heart:	n/a
12	chr6:31464699-31464749	Hela-S3	cervix:	n/a
13	chr6:31464699-31464749	BJ	skin:	n/a
14	chr6:31464699-31464749	HUVEC	blood vessel:	n/a
15	chr6:31464699-31464749	AG04450	lung:	fetal
16	chr6:31464699-31464749	GM12878	blood:	n/a
17	chr6:31464699-31464749	NHDF-neo	bronchial:	n/a
18	chr6:31464699-31464749	HCT-116	colon:	n/a
19	chr6:31464699-31464749	NH-A	brain:	n/a
20	chr6:31464699-31464749	AG10803	skin:	n/a
21	chr6:31464699-31464749	PANC-1	pancreas:	n/a
22	chr6:31464699-31464749	NT2-D1	testis:	n/a
23	chr6:31464699-31464749	IMR90	lung:	fetal
24	chr6:31464699-31464749	HRE	kidney:	n/a
25	chr6:31464699-31464749	HIPEpiC	eye:	n/a
26	chr6:31464699-31464749	A549	lung:	n/a
27	chr6:31464699-31464749	PrEC	prostate:	n/a
28	chr6:31464699-31464749	MCF-7	breast:	n/a
29	chr6:31464699-31464749	K562	blood:	n/a
30	chr6:31464699-31464749	HRCEpiC	kidney:	n/a
31	chr6:31464699-31464749	ovcar-3	ovarian:	n/a
32	chr6:31464699-31464749	SK-N-MC	brain:	n/a
33	chr6:31464699-31464749	T-47D	breast:	n/a
34	chr6:31464699-31464749	HRPEpiC	eye:	n/a
35	chr6:31464699-31464749	Hepatocyte	liver:	n/a
36	chr6:31464699-31464749	BE2_C	brain:	n/a
37	chr6:31464699-31464749	LNCaP	prostate:	n/a
38	chr6:31464699-31464749	Jurkat	blood:	n/a
39	chr6:31464699-31464749	AoSMC	blood vessel:	n/a
40	chr6:31464699-31464749	GM12891	blood:	n/a
41	chr6:31464699-31464749	SK-N-SH	brain:	n/a
42	chr6:31464699-31464749	ECC-1	luminal epithelium:	n/a
43	chr6:31464699-31464749	AG09309	skin:	n/a
44	chr6:31464699-31464749	HEK293	kidney:	embryo
45	chr6:31464699-31464749	HMEC	breast:	n/a
46	chr6:31464699-31464749	HCPEpiC	choroid plexus:	n/a
47	chr6:31464699-31464749	U87	brain:	n/a
48	chr6:31464699-31464749	HAEpiC	amniotic membrane:	n/a
49	chr6:31464699-31464749	RPTEC	kidney:	n/a
50	chr6:31464699-31464749	SAEC	small airway:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31462975..31464930-chr6:31587251..31589208,2	MCF-7	breast:
2	chr6:31462628..31467072-chr6:31508179..31511597,8	MCF-7	breast:
3	chr6:31459710..31467567-chr6:31506191..31511027,18	MCF-7	breast:
4	chr6:31463303..31465758-chr6:31589334..31591958,3	K562	blood:
5	chr6:29718134..29720156-chr6:31462731..31465532,2	MCF-7	breast:
6	chr6:31464396..31467286-chr6:31513352..31515783,2	MCF-7	breast:
7	chr6:31463965..31465758-chr6:31589334..31591777,2	K562	blood:
8	chr6:31462227..31464927-chr6:31513555..31516059,3	MCF-7	breast:
9	chr6:31164763..31166450-chr6:31463766..31465501,2	K562	blood:
10	chr6:31458384..31468965-chr6:31503613..31512721,28	K562	blood:
11	chr6:31464473..31467635-chr6:31497399..31499705,3	K562	blood:
12	chr6:31462191..31465976-chr6:31584426..31588689,4	K562	blood:
13	chr6:31460486..31468205-chr6:31503942..31512721,23	K562	blood:

No data

Variant related genes	Relation type
MICB	TF binding region
ENSG00000201680	TF binding region
MICB	CpG island
ENSG00000201680	CpG island
ENSG00000206344	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000213760	Chromatin interaction
ENSG00000201785	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000272236	Chromatin interaction
ENSG00000204498	Chromatin interaction
ENSG00000235821	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000272501	Chromatin interaction
ENSG00000199290	Chromatin interaction
ENSG00000254870	Chromatin interaction
ENSG00000200816	Chromatin interaction

Extended variants
information (count: 63 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:63 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015372	chr6:30704734-31582152	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
2	nsv538173	chr6:30704734-31582152	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	334 gene(s)	inside rSNPs	diseases
3	esv2758042	chr6:31028290-31497106	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	101 gene(s)	inside rSNPs	diseases
4	esv2759414	chr6:31028290-31542308	Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	151 gene(s)	inside rSNPs	diseases
5	esv3381377	chr6:31192213-31498578	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	72 gene(s)	inside rSNPs	diseases
6	esv3340592	chr6:31192248-31498535	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	72 gene(s)	inside rSNPs	diseases
7	nsv1021052	chr6:31206639-31485736	Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	61 gene(s)	inside rSNPs	diseases
8	nsv1022451	chr6:31279535-31485736	Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
9	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
10	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
11	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
12	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
13	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
14	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
15	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
16	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
17	nsv1018463	chr6:31337336-31525275	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	104 gene(s)	inside rSNPs	diseases
18	nsv538189	chr6:31337336-31525275	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	104 gene(s)	inside rSNPs	diseases
19	nsv432868	chr6:31338844-31721033	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	250 gene(s)	inside rSNPs	diseases
20	esv2752115	chr6:31352880-31498721	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
21	esv1831710	chr6:31352945-31477763	Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
22	nsv1034727	chr6:31353329-31465103	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
23	esv2752118	chr6:31353329-31481321	Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
24	esv2757162	chr6:31353329-31542308	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	99 gene(s)	inside rSNPs	diseases
25	esv1827731	chr6:31353930-31471391	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
26	esv1833123	chr6:31353930-31471391	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
27	esv1832352	chr6:31355100-31477763	Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
28	esv3475036	chr6:31356065-31465064	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
29	esv3475037	chr6:31356065-31465064	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
30	esv34684	chr6:31359621-31474688	Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
31	esv2752119	chr6:31359621-31498521	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
32	esv2752121	chr6:31359648-31465795	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
33	nsv1021984	chr6:31360095-31465103	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
34	nsv1030071	chr6:31360095-31465795	Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
35	nsv1020595	chr6:31360095-31474688	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
36	nsv1022499	chr6:31360095-31485174	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
37	nsv1031110	chr6:31362310-31465103	Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
38	nsv1026211	chr6:31362310-31474688	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
39	nsv1018716	chr6:31362310-31481299	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
40	nsv1015252	chr6:31362930-31465103	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
41	esv3434932	chr6:31377226-31471978	Flanking Bivalent TSS/Enh Active TSS Weak transcription Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
42	esv3362717	chr6:31377565-31479170	Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
43	nsv432874	chr6:31379821-31498521	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
44	nsv1022089	chr6:31383848-31465795	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
45	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
46	nsv1021331	chr6:31388423-31465103	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
47	nsv432877	chr6:31412961-31528690	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	88 gene(s)	inside rSNPs	diseases
48	nsv1018960	chr6:31446366-31481299	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
49	nsv1015886	chr6:31448533-31480272	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
50	nsv1025961	chr6:31448533-31497835	Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31459400-31466600	Active TSS	GM12878-XiMat	blood
2	chr6:31461200-31465000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:31462800-31465400	Weak transcription	Gastric	stomach
4	chr6:31462800-31465400	Weak transcription	Ovary	ovary
5	chr6:31462800-31466800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
6	chr6:31463000-31464800	Weak transcription	Aorta	Aorta
7	chr6:31463000-31464800	Weak transcription	Esophagus	oesophagus
8	chr6:31463000-31464800	Weak transcription	Pancreas	Pancrea
9	chr6:31463000-31465000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:31463000-31465000	Weak transcription	Right Ventricle	heart
11	chr6:31463000-31465400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
12	chr6:31463200-31465000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
13	chr6:31463200-31465200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
14	chr6:31463200-31465200	Weak transcription	Left Ventricle	heart
15	chr6:31463200-31465200	Enhancers	HSMM	muscle
16	chr6:31463200-31465400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr6:31463200-31465400	Weak transcription	Lung	lung
18	chr6:31463200-31465400	Enhancers	Spleen	Spleen
19	chr6:31463200-31465800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr6:31463200-31465800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
21	chr6:31463400-31464800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr6:31463400-31464800	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr6:31463400-31464800	Weak transcription	Liver	Liver
24	chr6:31463400-31464800	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr6:31463400-31464800	Enhancers	Thymus	Thymus
26	chr6:31463400-31465000	Enhancers	Primary T cells from cord blood	blood
27	chr6:31463400-31465000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
28	chr6:31463400-31465000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr6:31463400-31465000	Weak transcription	Colonic Mucosa	Colon
30	chr6:31463400-31465200	Weak transcription	HSMMtube	muscle
31	chr6:31463600-31464800	Enhancers	Primary B cells from peripheral blood	blood
32	chr6:31463600-31465000	Enhancers	Primary hematopoietic stem cells	blood
33	chr6:31463600-31465000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
34	chr6:31463600-31465000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr6:31463600-31465000	Enhancers	Fetal Thymus	thymus
36	chr6:31463600-31465000	Weak transcription	Right Atrium	heart
37	chr6:31463600-31465000	Enhancers	K562	blood
38	chr6:31463600-31465600	Weak transcription	Small Intestine	intestine
39	chr6:31463800-31464800	Enhancers	Primary T helper cells fromperipheralblood	blood
40	chr6:31463800-31464800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr6:31464000-31464800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr6:31464000-31464800	Enhancers	HUVEC	blood vessel
43	chr6:31464000-31464800	Enhancers	NHDF-Ad	bronchial
44	chr6:31464000-31464800	Enhancers	NHEK	skin
45	chr6:31464000-31464800	Enhancers	NHLF	lung
46	chr6:31464000-31465000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr6:31464000-31465000	Enhancers	HMEC	breast
48	chr6:31464000-31465000	Enhancers	Osteobl	bone
49	chr6:31464000-31465200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr6:31464200-31465000	Enhancers	Primary T cells fromperipheralblood	blood

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