Variant report

Variant rs372154966
Chromosome Location chr5:176923694-176923695
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:176916800-176923800 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
2 chr5:176917800-176924200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr5:176919600-176923800 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
4 chr5:176920000-176924000 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr5:176920200-176923800 Enhancers Fetal Brain Male brain
6 chr5:176920400-176924000 Enhancers Primary B cells from peripheral blood blood
7 chr5:176920400-176924000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr5:176920600-176923800 Flanking Active TSS Hela-S3 cervix
9 chr5:176920800-176924000 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr5:176921000-176923800 Enhancers Primary T cells fromperipheralblood blood
11 chr5:176921000-176923800 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
12 chr5:176921200-176923800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
13 chr5:176921200-176923800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr5:176921200-176923800 Transcr. at gene 5' and 3' Fetal Stomach stomach
15 chr5:176921200-176923800 Enhancers Small Intestine intestine
16 chr5:176921200-176923800 Transcr. at gene 5' and 3' NHLF lung
17 chr5:176921600-176924200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr5:176921800-176924000 Enhancers Primary T helper cells fromperipheralblood blood
19 chr5:176922000-176923800 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
20 chr5:176922000-176923800 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr5:176922000-176923800 Transcr. at gene 5' and 3' HSMMtube muscle
22 chr5:176922200-176925400 Active TSS Aorta Aorta
23 chr5:176922600-176924000 Enhancers Primary T cells from cord blood blood
24 chr5:176922600-176924400 Flanking Active TSS Adipose Nuclei Adipose
25 chr5:176922800-176923800 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:176922800-176924000 Flanking Active TSS Duodenum Mucosa Duodenum
27 chr5:176922800-176924200 Enhancers Primary T helper cells PMA-I stimulated --
28 chr5:176922800-176924200 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr5:176923000-176923800 Flanking Active TSS H1 Cell Line embryonic stem cell
30 chr5:176923000-176923800 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
31 chr5:176923000-176923800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
32 chr5:176923000-176923800 Flanking Active TSS Esophagus oesophagus
33 chr5:176923000-176923800 Bivalent Enhancer Stomach Mucosa stomach
34 chr5:176923000-176923800 Flanking Active TSS HMEC breast
35 chr5:176923000-176924000 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr5:176923000-176924000 Enhancers Sigmoid Colon Sigmoid Colon
37 chr5:176923000-176924400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
38 chr5:176923000-176924600 Flanking Active TSS Colonic Mucosa Colon
39 chr5:176923000-176924800 Active TSS Brain Hippocampus Middle brain
40 chr5:176923000-176925000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr5:176923000-176925200 Active TSS Brain Angular Gyrus brain
42 chr5:176923000-176925200 Active TSS Left Ventricle heart
43 chr5:176923000-176925600 Active TSS Brain Anterior Caudate brain
44 chr5:176923200-176923800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
45 chr5:176923200-176923800 Flanking Active TSS HUES48 Cell Line embryonic stem cell
46 chr5:176923200-176923800 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
47 chr5:176923200-176923800 Enhancers Primary B cells from cord blood blood
48 chr5:176923200-176923800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr5:176923200-176923800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr5:176923200-176923800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin

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