Variant report

Variant	rs372170634
Chromosome Location	chr3:159278045-159278046
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	esv3692798	chr3:159269142-159302556	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159277400-159278200	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr3:159277400-159278400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr3:159277600-159278200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr3:159277800-159278400	Bivalent Enhancer	HUVEC	blood vessel
5	chr3:159277800-159278600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
6	chr3:159277800-159278800	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr3:159277800-159279000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr3:159277800-159280200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
9	chr3:159277800-159280200	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr3:159277800-159280800	Enhancers	H1 Cell Line	embryonic stem cell
11	chr3:159278000-159278400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:159278000-159278400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr3:159278000-159278600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr3:159278000-159278600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr3:159278000-159278600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
16	chr3:159278000-159279800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr3:159278000-159280600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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