Variant report

Variant	rs372278134
Chromosome Location	chr1:169160031-169160032
allele	-/TGTTTCTTTTT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3522071	chr1:168978325-169339044	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
2	esv3522072	chr1:168978325-169339044	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
3	nsv831858	chr1:169022383-169179068	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
4	esv10418	chr1:169059628-169621268	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
5	esv5790	chr1:169159784-169160583	Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
6	esv3320802	chr1:169159905-169160455	Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
7	esv3373859	chr1:169159925-169160462	Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
8	esv3345733	chr1:169159941-169160437	Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases
9	esv3529377	chr1:169159951-169160388	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
10	esv4017	chr1:169159957-169160490	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
11	esv3320801	chr1:169159960-169160420	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
12	esv3320799	chr1:169159973-169160373	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
13	esv3529378	chr1:169159979-169160388	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
14	esv3529376	chr1:169159979-169160392	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
15	esv3383214	chr1:169159986-169160373	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
16	esv3320800	chr1:169160007-169160354	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
17	esv3320803	chr1:169160021-169160367	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases
18	esv1001229	chr1:169160024-169160352	Weak transcription	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169130400-169195200	Weak transcription	Pancreas	Pancrea
2	chr1:169150400-169162600	Weak transcription	Psoas Muscle	Psoas
3	chr1:169155600-169162800	Weak transcription	A549	lung
4	chr1:169158000-169162200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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