Variant report

Variant	rs372330382
Chromosome Location	chr6:69489484-69489485
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv886131	chr6:69480628-69545903	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv886132	chr6:69487204-69610281	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv1017659	chr6:69489481-69520127	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69484800-69490000	Enhancers	Fetal Brain Female	brain
2	chr6:69485000-69490400	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr6:69486200-69489600	Enhancers	Fetal Lung	lung
4	chr6:69487600-69491200	Enhancers	Brain Germinal Matrix	brain
5	chr6:69487800-69490400	Enhancers	Fetal Brain Male	brain
6	chr6:69487800-69490600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:69487800-69490600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr6:69488400-69490000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr6:69488800-69489600	Flanking Active TSS	Brain Anterior Caudate	brain
10	chr6:69488800-69489600	Flanking Active TSS	Brain Substantia Nigra	brain
11	chr6:69489200-69489600	Flanking Active TSS	Brain Cingulate Gyrus	brain
12	chr6:69489200-69489600	Flanking Active TSS	Brain Hippocampus Middle	brain
13	chr6:69489200-69489600	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
14	chr6:69489200-69490600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr6:69489400-69489600	Enhancers	Brain Angular Gyrus	brain
16	chr6:69489400-69490200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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