Variant report

Variant	rs372510018
Chromosome Location	chr11:119489979-119489980
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042460	chr11:119430954-119540452	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv898419	chr11:119488646-119518006	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv898420	chr11:119488646-119541332	Enhancers Genic enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119485400-119490400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr11:119488600-119494600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr11:119488800-119494600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr11:119489000-119490000	Enhancers	Brain Substantia Nigra	brain
5	chr11:119489000-119493200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr11:119489000-119493400	Weak transcription	Brain Anterior Caudate	brain
7	chr11:119489200-119490000	Enhancers	Brain Hippocampus Middle	brain
8	chr11:119489200-119490400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr11:119489200-119494200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr11:119489200-119494600	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr11:119489400-119493400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr11:119489400-119494400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr11:119489600-119490000	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr11:119489600-119495200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:119489600-119496200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr11:119489800-119493200	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr11:119489800-119493400	Weak transcription	Brain Cingulate Gyrus	brain
18	chr11:119489800-119494400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr11:119489800-119496000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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