Variant report

Variant	rs372574214
Chromosome Location	chr9:96730596-96730597
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893589	chr9:96624645-96884544	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	esv3520746	chr9:96730253-96730812	Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2072718	chr9:96730258-96730801	Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3520747	chr9:96730266-96730679	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3482537	chr9:96730281-96730668	Enhancers Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3482538	chr9:96730285-96730693	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3520745	chr9:96730288-96730648	Enhancers Genic enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3520743	chr9:96730289-96730735	Enhancers Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3482536	chr9:96730292-96730637	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3350777	chr9:96730308-96730618	Enhancers Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3546	chr9:96730324-96730776	Genic enhancers Enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3482539	chr9:96730331-96730603	Enhancers Genic enhancers Weak transcription Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3520744	chr9:96730344-96730597	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv989152	chr9:96730346-96730597	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv415390	chr9:96730346-96730597	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3482540	chr9:96730346-96730611	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3520748	chr9:96730346-96730611	Enhancers Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	esv1787352	chr9:96730358-96730610	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96725400-96730800	Weak transcription	Stomach Mucosa	stomach
2	chr9:96726600-96731800	Genic enhancers	Stomach Smooth Muscle	stomach
3	chr9:96728600-96730800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr9:96728800-96730600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr9:96729600-96730800	Weak transcription	Esophagus	oesophagus
6	chr9:96729800-96732800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr9:96730000-96730600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr9:96730000-96731600	Enhancers	Fetal Muscle Trunk	muscle
9	chr9:96730400-96730800	Weak transcription	Fetal Stomach	stomach
10	chr9:96730400-96731600	Enhancers	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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