| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1025856 |
chr5:59188419-59928852 |
Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv598288 |
chr5:59627555-60003460 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
26 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1018614 |
chr5:59708223-59910308 |
Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv881711 |
chr5:59724947-59890278 |
Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3423061 |
chr5:59864495-59868793 |
ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
esv3425428 |
chr5:59865195-59867893 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
