Variant report

Variant rs372752209
Chromosome Location chr7:5458759-5458760
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:5456800-5458800 Enhancers Fetal Heart heart
2 chr7:5457000-5459000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:5457000-5459400 Flanking Active TSS Stomach Smooth Muscle stomach
4 chr7:5457000-5461400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
5 chr7:5457200-5458800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr7:5457200-5458800 Enhancers Placenta Amnion Placenta Amnion
7 chr7:5457200-5458800 Flanking Active TSS NHDF-Ad bronchial
8 chr7:5457200-5459200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
9 chr7:5457200-5459400 Flanking Active TSS Primary hematopoietic stem cells blood
10 chr7:5457200-5461000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
11 chr7:5457400-5458800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr7:5457400-5459400 Flanking Active TSS A549 lung
13 chr7:5457600-5458800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr7:5457600-5458800 Flanking Active TSS Colon Smooth Muscle Colon
15 chr7:5457600-5461000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
16 chr7:5457800-5458800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr7:5457800-5458800 Bivalent Enhancer Primary B cells from cord blood blood
18 chr7:5457800-5458800 Flanking Active TSS Fetal Brain Male brain
19 chr7:5457800-5458800 Flanking Active TSS Stomach Mucosa stomach
20 chr7:5457800-5459000 Flanking Active TSS Rectal Smooth Muscle rectum
21 chr7:5457800-5459200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
22 chr7:5457800-5459200 Flanking Active TSS Brain Anterior Caudate brain
23 chr7:5457800-5459200 Flanking Active TSS Duodenum Mucosa Duodenum
24 chr7:5457800-5459600 Flanking Active TSS Hela-S3 cervix
25 chr7:5457800-5459800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
26 chr7:5457800-5461400 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
27 chr7:5458000-5458800 Bivalent Enhancer Primary T cells fromperipheralblood blood
28 chr7:5458000-5458800 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
29 chr7:5458000-5459000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
30 chr7:5458000-5459000 Flanking Active TSS Brain Cingulate Gyrus brain
31 chr7:5458000-5459000 Flanking Active TSS Ovary ovary
32 chr7:5458000-5459000 Flanking Active TSS HSMM muscle
33 chr7:5458000-5459000 Flanking Active TSS K562 blood
34 chr7:5458000-5459200 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
35 chr7:5458000-5459200 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
36 chr7:5458000-5459200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr7:5458000-5459200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
38 chr7:5458000-5459200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
39 chr7:5458000-5459200 Flanking Active TSS Colonic Mucosa Colon
40 chr7:5458000-5459200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
41 chr7:5458000-5459200 Flanking Active TSS Pancreas Pancrea
42 chr7:5458000-5459200 Flanking Active TSS HUVEC blood vessel
43 chr7:5458000-5459200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
44 chr7:5458000-5459200 Flanking Active TSS NHEK skin
45 chr7:5458000-5459200 Flanking Active TSS Osteobl bone
46 chr7:5458000-5459400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
47 chr7:5458000-5459400 Flanking Active TSS Brain Hippocampus Middle brain
48 chr7:5458000-5459400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
49 chr7:5458000-5459400 Flanking Active TSS NH-A brain
50 chr7:5458000-5460200 Flanking Active TSS Primary neutrophils fromperipheralblood blood

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