Variant report

Variant rs372825
Chromosome Location chr4:48354621-48354622
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:48344800-48362400 Weak transcription Gastric stomach
2 chr4:48345800-48356000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
3 chr4:48345800-48356600 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr4:48346000-48362800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr4:48346200-48356200 Weak transcription Fetal Thymus thymus
6 chr4:48346200-48356600 Weak transcription HUVEC blood vessel
7 chr4:48346200-48358400 Weak transcription Small Intestine intestine
8 chr4:48346200-48362400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr4:48346400-48361200 Weak transcription Thymus Thymus
10 chr4:48346600-48354800 Weak transcription Primary B cells from cord blood blood
11 chr4:48346600-48371000 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr4:48347200-48359600 Weak transcription Fetal Stomach stomach
13 chr4:48347400-48362200 Weak transcription Brain Substantia Nigra brain
14 chr4:48347400-48362200 Weak transcription NHLF lung
15 chr4:48347600-48365000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr4:48348600-48362400 Weak transcription Fetal Lung lung
17 chr4:48348800-48355800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr4:48348800-48358200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr4:48348800-48363000 Weak transcription Hela-S3 cervix
20 chr4:48348800-48371000 Weak transcription Primary hematopoietic stem cells blood
21 chr4:48349000-48356600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr4:48349000-48358400 Weak transcription HSMM muscle
23 chr4:48349400-48357200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:48349400-48358000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr4:48349400-48361800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:48349400-48361800 Weak transcription HMEC breast
27 chr4:48349400-48362200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr4:48349600-48357000 Weak transcription Lung lung
29 chr4:48349600-48363200 Weak transcription Adipose Nuclei Adipose
30 chr4:48349600-48364400 Weak transcription Right Atrium heart
31 chr4:48350000-48358600 Weak transcription Ovary ovary
32 chr4:48350000-48375800 Weak transcription Primary monocytes fromperipheralblood blood
33 chr4:48350400-48355400 Enhancers Primary T helper cells fromperipheralblood blood
34 chr4:48350600-48355800 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr4:48351400-48361400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr4:48351400-48362600 Weak transcription A549 lung
37 chr4:48351600-48355200 Weak transcription HepG2 liver
38 chr4:48352400-48354800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr4:48352400-48358400 Weak transcription NHEK skin
40 chr4:48352400-48362200 Weak transcription Left Ventricle heart
41 chr4:48352800-48358200 Weak transcription Colon Smooth Muscle Colon
42 chr4:48352800-48372400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr4:48353000-48371200 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr4:48353200-48355000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr4:48353200-48362800 Weak transcription Brain Hippocampus Middle brain
46 chr4:48353200-48362800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr4:48353400-48355200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr4:48353600-48354800 Strong transcription Dnd41 blood
49 chr4:48353600-48355200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
50 chr4:48353600-48356600 Weak transcription Psoas Muscle Psoas

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