Variant report

Variant	rs373043532
Chromosome Location	chr1:62656023-62656024
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1004446	chr1:62394631-62813533	Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases
2	nsv534984	chr1:62394631-62813533	Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases
3	nsv461650	chr1:62542717-62657530	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	nsv546417	chr1:62542717-62657530	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
5	nsv870842	chr1:62644118-62679202	Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv546418	chr1:62646182-62656809	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
7	nsv546419	chr1:62650550-62656809	Weak transcription Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
8	esv3452297	chr1:62652564-62657162	Weak transcription	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv819557	chr1:62652920-62657976	Weak transcription Enhancers Bivalent Enhancer	TF binding region CpG island lncRNA	3 gene(s)	inside rSNPs	diseases
10	esv3452299	chr1:62654164-62658462	Enhancers Weak transcription Bivalent Enhancer	TF binding region CpG island lncRNA	3 gene(s)	inside rSNPs	diseases
11	esv3452295	chr1:62654286-62657413	Enhancers Weak transcription Bivalent Enhancer	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
12	esv3452300	chr1:62654603-62657288	Weak transcription Bivalent Enhancer Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
13	esv3452296	chr1:62654654-62657261	Weak transcription Bivalent Enhancer Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
14	nsv823009	chr1:62654665-62657067	Weak transcription	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
15	nsv821202	chr1:62654665-62657214	Weak transcription Bivalent Enhancer Enhancers	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
16	nsv823020	chr1:62654665-62657214	Weak transcription Enhancers Bivalent Enhancer	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
17	esv3452301	chr1:62654738-62657195	Weak transcription	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases
18	esv15807	chr1:62654849-62657214	Enhancers Bivalent Enhancer Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
19	esv1820932	chr1:62654877-62656452	Weak transcription	lncRNA	n/a	inside rSNPs	diseases
20	nsv546420	chr1:62654877-62656452	Weak transcription	lncRNA	n/a	inside rSNPs	diseases
21	nsv546421	chr1:62654877-62656587	Weak transcription	lncRNA	n/a	inside rSNPs	diseases
22	nsv546422	chr1:62654877-62656698	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
23	nsv546423	chr1:62654877-62656809	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
24	esv1819239	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
25	esv1820299	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
26	esv1822324	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
27	esv1822774	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
28	esv1834569	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
29	esv1838480	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
30	esv1839317	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
31	esv1839848	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
32	nsv546424	chr1:62654877-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
33	esv1842000	chr1:62654877-62657063	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
34	nsv546425	chr1:62654877-62657063	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
35	esv1818258	chr1:62654877-62657186	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
36	esv1837014	chr1:62654877-62657186	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
37	nsv546426	chr1:62654928-62656809	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
38	nsv546427	chr1:62654928-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
39	nsv546428	chr1:62654928-62657186	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
40	nsv546429	chr1:62654985-62656809	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
41	nsv546430	chr1:62654985-62656925	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
42	nsv546431	chr1:62655475-62657186	Weak transcription	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:62646600-62660400	Weak transcription	Right Atrium	heart
2	chr1:62649800-62660000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:62650400-62658400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr1:62650400-62658800	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:62652000-62660200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:62656000-62657400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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