Variant report

Variant rs373058342
Chromosome Location chr6:32156088-32156089
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32146800-32156600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32147200-32156400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr6:32147600-32156200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:32147600-32156200 Genic enhancers Primary T cells fromperipheralblood blood
5 chr6:32149800-32156600 Weak transcription Stomach Mucosa stomach
6 chr6:32150200-32156200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr6:32151000-32156400 Weak transcription Ovary ovary
8 chr6:32152400-32156200 Weak transcription Hela-S3 cervix
9 chr6:32152400-32160600 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr6:32153600-32156200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:32153600-32156200 Genic enhancers Primary monocytes fromperipheralblood blood
12 chr6:32153600-32156200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr6:32153800-32156200 Genic enhancers Placenta Placenta
14 chr6:32153800-32156200 Genic enhancers Fetal Thymus thymus
15 chr6:32153800-32156400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:32153800-32156400 Genic enhancers Spleen Spleen
17 chr6:32154000-32156200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr6:32154000-32156200 Genic enhancers Lung lung
19 chr6:32154000-32156200 Genic enhancers Skeletal Muscle Male skeletal muscle
20 chr6:32154000-32156200 Genic enhancers K562 blood
21 chr6:32154000-32156600 Genic enhancers Liver Liver
22 chr6:32154200-32156200 Genic enhancers Cortex derived primary cultured neurospheres brain
23 chr6:32154200-32156400 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
24 chr6:32154200-32156400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
25 chr6:32154400-32156200 Genic enhancers Primary T helper naive cells from peripheral blood blood
26 chr6:32154400-32156200 Genic enhancers Right Ventricle heart
27 chr6:32154400-32156400 Genic enhancers Primary B cells from peripheral blood blood
28 chr6:32154600-32156200 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
29 chr6:32154600-32156400 Genic enhancers Thymus Thymus
30 chr6:32154600-32156800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
31 chr6:32154800-32156800 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
32 chr6:32154800-32157000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:32155000-32156200 Strong transcription iPS-15b Cell Line embryonic stem cell
34 chr6:32155000-32156200 Weak transcription Psoas Muscle Psoas
35 chr6:32155000-32156400 Weak transcription Small Intestine intestine
36 chr6:32155200-32156200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
37 chr6:32155200-32156200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr6:32155200-32156200 Genic enhancers Brain Angular Gyrus brain
39 chr6:32155200-32156200 Weak transcription Left Ventricle heart
40 chr6:32155200-32157000 Transcr. at gene 5' and 3' Dnd41 blood
41 chr6:32155400-32156200 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
42 chr6:32155400-32156200 Genic enhancers Primary T helper cells PMA-I stimulated --
43 chr6:32155400-32156200 Weak transcription Brain Substantia Nigra brain
44 chr6:32155400-32156400 Weak transcription A549 lung
45 chr6:32155600-32156200 Genic enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:32155600-32156200 Enhancers Primary B cells from cord blood blood
47 chr6:32155600-32156200 Genic enhancers Primary T helper cells fromperipheralblood blood
48 chr6:32155600-32156200 Weak transcription Fetal Brain Male brain
49 chr6:32155600-32156200 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr6:32155600-32156200 Genic enhancers HepG2 liver

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