Variant report

Variant	rs373104978
Chromosome Location	chr8:103822111-103822112
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:40)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:40 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:103674710..103676295-chr8:103820852..103822638,2	MCF-7	breast:
2	chr8:103681131..103683313-chr8:103821848..103824380,2	MCF-7	breast:
3	chr8:103596405..103599934-chr8:103821942..103825203,3	MCF-7	breast:
4	chr8:103592013..103594944-chr8:103820236..103822716,2	MCF-7	breast:
5	chr8:103241583..103244347-chr8:103821474..103823149,2	K562	blood:
6	chr16:78495514..78497334-chr8:103819724..103822286,2	MCF-7	breast:
7	chr8:103758707..103761141-chr8:103820912..103822776,2	MCF-7	breast:
8	chr8:103817439..103824960-chr8:103872390..103877790,15	MCF-7	breast:
9	chr8:103638288..103640009-chr8:103821096..103823943,2	MCF-7	breast:
10	chr8:103672018..103673821-chr8:103819669..103822518,2	K562	blood:
11	chr2:208036628..208038227-chr8:103821517..103823271,2	MCF-7	breast:
12	chr8:103421399..103423830-chr8:103819502..103822467,3	K562	blood:
13	chr8:103728869..103730949-chr8:103820340..103823063,2	MCF-7	breast:
14	chr8:103657627..103672045-chr8:103815832..103826635,94	K562	blood:
15	chr8:103306340..103308594-chr8:103820369..103822986,2	MCF-7	breast:
16	chr8:103446967..103449088-chr8:103820705..103822908,2	MCF-7	breast:
17	chr8:103740249..103747213-chr8:103818698..103822838,8	MCF-7	breast:
18	chr8:103696488..103698955-chr8:103820136..103822762,2	MCF-7	breast:
19	chr8:103659827..103671648-chr8:103816894..103829599,93	K562	blood:
20	chr8:103420136..103427906-chr8:103815410..103825210,22	MCF-7	breast:
21	chr8:103644446..103678119-chr8:103815618..103829807,419	MCF-7	breast:
22	chr8:103441212..103444184-chr8:103820683..103822944,2	MCF-7	breast:
23	chr8:103643403..103646605-chr8:103821191..103823533,3	MCF-7	breast:
24	chr8:103713778..103716086-chr8:103819862..103822357,3	MCF-7	breast:
25	chr8:103672172..103673821-chr8:103821018..103822916,2	K562	blood:
26	chr8:103816389..103823057-chr8:103875264..103878654,9	K562	blood:
27	chr8:103817889..103824823-chr8:103872385..103879164,18	MCF-7	breast:
28	chr8:103768653..103771082-chr8:103821061..103822803,2	K562	blood:
29	chr8:103248364..103250740-chr8:103821721..103824052,2	MCF-7	breast:
30	chr8:103520610..103522494-chr8:103820924..103823364,2	MCF-7	breast:
31	chr8:103626178..103629397-chr8:103820874..103826100,7	MCF-7	breast:
32	chr8:103740987..103747065-chr8:103820578..103824576,6	K562	blood:
33	chr8:103692803..103694427-chr8:103820243..103822323,2	MCF-7	breast:
34	chr8:103634893..103636918-chr8:103821409..103822917,2	MCF-7	breast:
35	chr8:103703111..103704923-chr8:103821705..103823868,2	K562	blood:
36	chr8:103801276..103802081-chr8:103821575..103822409,2	MCF-7	breast:
37	chr8:103653489..103674518-chr8:103809987..103832119,275	MCF-7	breast:
38	chr8:103739412..103741779-chr8:103821663..103824081,2	MCF-7	breast:
39	chr8:103623532..103635312-chr8:103817499..103824242,24	MCF-7	breast:
40	chr8:103705965..103707674-chr8:103821217..103823842,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000155096	Chromatin interaction
ENSG00000253320	Chromatin interaction
ENSG00000155090	Chromatin interaction
ENSG00000253382	Chromatin interaction
ENSG00000104517	Chromatin interaction
ENSG00000266799	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	esv1814245	chr8:103735804-103824566	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
3	nsv1021898	chr8:103767324-103922482	Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv465751	chr8:103817106-103894326	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
5	nsv611822	chr8:103817106-103894326	Flanking Active TSS Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
6	esv3402705	chr8:103821801-103824349	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103816800-103822400	Enhancers	Spleen	Spleen
2	chr8:103817200-103822800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:103818600-103822200	Enhancers	HUVEC	blood vessel
4	chr8:103819200-103822800	Enhancers	Placenta Amnion	Placenta Amnion
5	chr8:103819400-103822600	Flanking Active TSS	A549	lung
6	chr8:103819400-103822600	Flanking Active TSS	Hela-S3	cervix
7	chr8:103819400-103822800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
8	chr8:103819600-103822200	Enhancers	Primary hematopoietic stem cells	blood
9	chr8:103819600-103822400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr8:103819600-103822400	Enhancers	Left Ventricle	heart
11	chr8:103819600-103822600	Weak transcription	Ovary	ovary
12	chr8:103819800-103822200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
13	chr8:103819800-103822200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr8:103819800-103822200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr8:103819800-103822200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr8:103819800-103822400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr8:103819800-103822400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
18	chr8:103819800-103822400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr8:103819800-103822400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr8:103819800-103822400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr8:103819800-103822400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr8:103819800-103822400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
23	chr8:103819800-103822400	Enhancers	Fetal Stomach	stomach
24	chr8:103819800-103822400	Enhancers	Fetal Thymus	thymus
25	chr8:103819800-103822400	Enhancers	Pancreas	Pancrea
26	chr8:103819800-103822400	Enhancers	Right Atrium	heart
27	chr8:103819800-103823000	Enhancers	Fetal Heart	heart
28	chr8:103819800-103823400	Enhancers	Stomach Mucosa	stomach
29	chr8:103819800-103823800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
30	chr8:103820000-103822200	Enhancers	Primary B cells from cord blood	blood
31	chr8:103820000-103822200	Enhancers	K562	blood
32	chr8:103820000-103822400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr8:103820000-103822400	Enhancers	Primary monocytes fromperipheralblood	blood
34	chr8:103820000-103822400	Enhancers	Primary B cells from peripheral blood	blood
35	chr8:103820000-103822400	Enhancers	Primary T cells from cord blood	blood
36	chr8:103820000-103822400	Enhancers	Primary T cells fromperipheralblood	blood
37	chr8:103820000-103822400	Enhancers	Primary T helper naive cells from peripheral blood	blood
38	chr8:103820000-103822400	Enhancers	Liver	Liver
39	chr8:103820000-103822400	Enhancers	Fetal Muscle Trunk	muscle
40	chr8:103820200-103822200	Enhancers	HUES6 Cell Line	embryonic stem cell
41	chr8:103820200-103822200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr8:103820200-103822200	Enhancers	Primary neutrophils fromperipheralblood	blood
43	chr8:103820200-103822200	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr8:103820200-103822200	Enhancers	NHDF-Ad	bronchial
45	chr8:103820200-103822400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr8:103820200-103822400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr8:103820200-103822400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
48	chr8:103820200-103822400	Enhancers	Primary T helper cells fromperipheralblood	blood
49	chr8:103820200-103822400	Enhancers	Brain Angular Gyrus	brain
50	chr8:103820200-103822400	Enhancers	Fetal Muscle Leg	muscle

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