Variant report

Variant	rs373108065
Chromosome Location	chr18:40387789-40387790
allele	-/TGTA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833632	chr18:40187679-40388058	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1056794	chr18:40197837-40688514	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv3337581	chr18:40387154-40390952	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv1471885	chr18:40387789-40387791	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40384200-40387800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr18:40387200-40389400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr18:40387400-40388800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr18:40387400-40389000	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr18:40387600-40387800	Enhancers	Fetal Lung	lung
6	chr18:40387600-40388000	Enhancers	Brain Anterior Caudate	brain
7	chr18:40387600-40388400	Enhancers	iPS-18 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links