Variant report

Variant	rs373147134
Chromosome Location	chr11:66884370-66884371
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:66864238..66866456-chr11:66880720..66884624,3	MCF-7	breast:
2	chr11:66882735..66884511-chr11:66919392..66921298,2	MCF-7	breast:
3	chr11:66883623..66889678-chr11:67005085..67009894,16	K562	blood:
4	chr11:66847793..66850553-chr11:66883657..66886437,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000173120	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531397	chr11:66653381-67465721	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
2	nsv532287	chr11:66784014-67023899	Weak transcription Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
3	esv3412807	chr11:66884326-66888124	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66879000-66885200	Weak transcription	Right Ventricle	heart
2	chr11:66879200-66884600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr11:66879200-66885000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr11:66879200-66885000	Weak transcription	Right Atrium	heart
5	chr11:66879200-66885200	Weak transcription	Left Ventricle	heart
6	chr11:66879400-66884800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr11:66879400-66884800	Weak transcription	Adipose Nuclei	Adipose
8	chr11:66879400-66885000	Weak transcription	Stomach Smooth Muscle	stomach
9	chr11:66879600-66884400	Weak transcription	Colon Smooth Muscle	Colon
10	chr11:66879600-66884400	Weak transcription	Rectal Smooth Muscle	rectum
11	chr11:66879600-66884800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr11:66879600-66884800	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr11:66879600-66884800	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr11:66879600-66885000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr11:66880400-66885000	Enhancers	Fetal Intestine Small	intestine
16	chr11:66880600-66885000	Enhancers	Fetal Intestine Large	intestine
17	chr11:66881000-66886800	Weak transcription	K562	blood
18	chr11:66881200-66884400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr11:66881200-66884400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr11:66881200-66884400	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr11:66881200-66884600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
22	chr11:66881200-66884800	Weak transcription	H1 Cell Line	embryonic stem cell
23	chr11:66881200-66884800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr11:66881200-66885000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr11:66881200-66885000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr11:66881200-66885000	Weak transcription	Esophagus	oesophagus
27	chr11:66881200-66885200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr11:66881200-66885200	Weak transcription	Dnd41	blood
29	chr11:66881400-66884600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
30	chr11:66881400-66885000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr11:66881600-66884800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
32	chr11:66881800-66884800	Enhancers	Primary monocytes fromperipheralblood	blood
33	chr11:66881800-66885000	Weak transcription	Primary T cells fromperipheralblood	blood
34	chr11:66882000-66885000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr11:66882200-66885000	Weak transcription	Colonic Mucosa	Colon
36	chr11:66882600-66884800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr11:66882600-66885200	Enhancers	A549	lung
38	chr11:66882800-66885000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr11:66882800-66885000	Enhancers	Stomach Mucosa	stomach
40	chr11:66883000-66884600	Enhancers	HepG2	liver
41	chr11:66883000-66884800	Weak transcription	Liver	Liver
42	chr11:66883200-66884600	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr11:66883200-66884600	Enhancers	Primary T cells from cord blood	blood
44	chr11:66883200-66885000	Weak transcription	Primary B cells from peripheral blood	blood
45	chr11:66883400-66884600	Enhancers	iPS-15b Cell Line	embryonic stem cell
46	chr11:66883400-66884800	Weak transcription	Primary hematopoietic stem cells	blood
47	chr11:66883400-66885000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr11:66883600-66884600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr11:66883600-66884600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
50	chr11:66883600-66884800	Enhancers	Primary neutrophils fromperipheralblood	blood

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