Variant report

Variant	rs373270150
Chromosome Location	chr8:102658196-102658197
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:102652172..102654283-chr8:102658129..102660211,2	K562	blood:
2	chr8:102657037..102659278-chr8:102659929..102662288,2	MCF-7	breast:
3	chr8:102503159..102506071-chr8:102657015..102659448,3	MCF-7	breast:
4	chr8:102658165..102659183-chr8:103208962..103210318,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000254024	Chromatin interaction
ENSG00000083307	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3401576	chr8:102640273-102724495	Weak transcription Genic enhancers Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	esv3379599	chr8:102658053-102658459	Weak transcription Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102644600-102663800	Weak transcription	Lung	lung
2	chr8:102644800-102674600	Weak transcription	Ovary	ovary
3	chr8:102648600-102663600	Weak transcription	Rectal Smooth Muscle	rectum
4	chr8:102650600-102664400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
5	chr8:102650800-102662400	Strong transcription	H1 Cell Line	embryonic stem cell
6	chr8:102650800-102664600	Strong transcription	HUES48 Cell Line	embryonic stem cell
7	chr8:102651200-102658800	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr8:102651400-102681200	Weak transcription	Stomach Mucosa	stomach
9	chr8:102652200-102658800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr8:102653200-102658600	Weak transcription	Fetal Muscle Leg	muscle
11	chr8:102653200-102661000	Strong transcription	Placenta Amnion	Placenta Amnion
12	chr8:102654000-102658600	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr8:102655000-102661800	Strong transcription	Fetal Intestine Small	intestine
14	chr8:102655200-102658400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr8:102655200-102658400	Weak transcription	Hela-S3	cervix
16	chr8:102655200-102663800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr8:102655200-102669400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr8:102655600-102658200	Strong transcription	Rectal Mucosa Donor 29	rectum
19	chr8:102655600-102661800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr8:102655600-102664400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr8:102655600-102664400	Strong transcription	Duodenum Mucosa	Duodenum
22	chr8:102655800-102662000	Strong transcription	H9 Cell Line	embryonic stem cell
23	chr8:102656000-102658600	Strong transcription	Placenta	Placenta
24	chr8:102656400-102663800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr8:102656600-102660200	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr8:102656600-102660800	Weak transcription	Colonic Mucosa	Colon
27	chr8:102657000-102658400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr8:102657000-102658400	Weak transcription	Fetal Intestine Large	intestine
29	chr8:102657000-102658400	Weak transcription	NHEK	skin
30	chr8:102657000-102659000	Weak transcription	Pancreas	Pancrea
31	chr8:102657000-102661600	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr8:102657200-102660200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr8:102657200-102661600	Weak transcription	HUES6 Cell Line	embryonic stem cell
34	chr8:102657200-102668200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
35	chr8:102657800-102659200	Enhancers	Fetal Heart	heart
36	chr8:102657800-102659400	Enhancers	GM12878-XiMat	blood
37	chr8:102658000-102658400	Weak transcription	Gastric	stomach
38	chr8:102658000-102658800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr8:102658000-102658800	Weak transcription	Esophagus	oesophagus
40	chr8:102658000-102658800	Weak transcription	HMEC	breast
41	chr8:102658000-102660400	Weak transcription	Fetal Stomach	stomach
42	chr8:102658000-102661200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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