Variant report

Variant rs373405459
Chromosome Location chr1:84610755-84610756
allele -/ATAAC
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84588000-84618400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr1:84607000-84613600 Weak transcription Brain Angular Gyrus brain
3 chr1:84609000-84610800 Weak transcription Gastric stomach
4 chr1:84609400-84612800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:84609400-84612800 Enhancers Muscle Satellite Cultured Cells --
6 chr1:84609600-84611000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:84609600-84611400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:84609600-84612600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:84609600-84612600 Enhancers NHDF-Ad bronchial
10 chr1:84609600-84612600 Enhancers NHEK skin
11 chr1:84609600-84612600 Enhancers Osteobl bone
12 chr1:84609600-84612800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:84609600-84613000 Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr1:84609600-84613800 Active TSS Rectal Mucosa Donor 29 rectum
15 chr1:84609600-84614000 Active TSS Primary T cells fromperipheralblood blood
16 chr1:84609800-84611200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:84609800-84611200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:84609800-84611200 Active TSS Duodenum Smooth Muscle Duodenum
19 chr1:84609800-84611200 Enhancers HMEC breast
20 chr1:84609800-84611400 Active TSS Primary B cells from peripheral blood blood
21 chr1:84609800-84611400 Active TSS Adipose Nuclei Adipose
22 chr1:84609800-84611600 Active TSS HUVEC blood vessel
23 chr1:84609800-84612400 Active TSS Primary hematopoietic stem cells short term culture blood
24 chr1:84609800-84612400 Active TSS Primary T helper memory cells from peripheral blood 1 blood
25 chr1:84609800-84612400 Active TSS Primary T killer naive cells fromperipheralblood blood
26 chr1:84609800-84612400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:84609800-84612800 Active TSS Primary T killer memory cells from peripheral blood blood
28 chr1:84609800-84612800 Active TSS Fetal Thymus thymus
29 chr1:84609800-84612800 Active TSS Thymus Thymus
30 chr1:84609800-84612800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
31 chr1:84609800-84613000 Enhancers Primary neutrophils fromperipheralblood blood
32 chr1:84609800-84613000 Active TSS Primary T helper naive cells from peripheral blood blood
33 chr1:84609800-84613400 Active TSS Primary Natural Killer cells fromperipheralblood blood
34 chr1:84609800-84613800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:84610000-84611200 Active TSS Brain Anterior Caudate brain
36 chr1:84610000-84611200 Active TSS GM12878-XiMat blood
37 chr1:84610000-84611600 Active TSS Primary T cells from cord blood blood
38 chr1:84610000-84611600 Active TSS Fetal Stomach stomach
39 chr1:84610000-84612600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
40 chr1:84610000-84612600 Active TSS Colonic Mucosa Colon
41 chr1:84610000-84612600 Active TSS Rectal Mucosa Donor 31 rectum
42 chr1:84610000-84612600 Active TSS Rectal Smooth Muscle rectum
43 chr1:84610200-84610800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr1:84610200-84610800 Weak transcription Stomach Mucosa stomach
45 chr1:84610200-84611400 Active TSS Liver Liver
46 chr1:84610200-84611600 Active TSS Primary monocytes fromperipheralblood blood
47 chr1:84610200-84611600 Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr1:84610200-84611600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:84610200-84611800 Active TSS Primary hematopoietic stem cells blood
50 chr1:84610200-84611800 Active TSS Primary T helper cells fromperipheralblood blood

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