The 2.0 version of rSNPBase
Home
Search
Document
What's New
Tutorial
Data Content
Download
Feedback
About Us
Variant report
Variant
rs373682697
Chromosome Location
chr3:146994651-146994652
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:1)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
(count:1 , 50 per page) page:
1
No.
lncRNA name
Chromosome Location
lncRNA alias
1
lnc-ZIC1-7
chr3:146994555-146994774
NONHSAT092574
No data
No data
No data
Extended variants information (count: 3 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv3385588
chr3:146782324-147083081
Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS
TF binding regionCpG islandChromatin interactive regionlncRNA
5 gene(s)
inside rSNPs
diseases
2
nsv877628
chr3:146964828-147058367
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
TF binding regionCpG islandChromatin interactive regionlncRNA
4 gene(s)
inside rSNPs
n/a
3
nsv967076
chr3:146986109-146995619
Inactive region
TF binding regionlncRNA
1 gene(s)
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links