The 2.0 version of rSNPBase

Variant report

Variant rs373880004
Chromosome Location chr9:100132338-100132339
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100077000-100140800 Weak transcription Fetal Brain Male brain
2 chr9:100088600-100132800 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr9:100090600-100133800 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr9:100091600-100149200 Weak transcription Primary T helper naive cells fromperipheralblood blood
5 chr9:100104400-100142000 Weak transcription Rectal Smooth Muscle rectum
6 chr9:100106800-100143200 Weak transcription Liver Liver
7 chr9:100107200-100138400 Weak transcription Placenta Amnion Placenta Amnion
8 chr9:100108000-100148200 Weak transcription Esophagus oesophagus
9 chr9:100115400-100144600 Weak transcription Hela-S3 cervix
10 chr9:100115600-100139200 Weak transcription H9 Cell Line embryonic stem cell
11 chr9:100117400-100132400 Weak transcription Fetal Intestine Large intestine
12 chr9:100117400-100145000 Weak transcription Colon Smooth Muscle Colon
13 chr9:100117600-100146400 Weak transcription Small Intestine intestine
14 chr9:100118200-100132400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr9:100118200-100141600 Weak transcription Primary T cells from cord blood blood
16 chr9:100120000-100137800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr9:100121800-100137800 Weak transcription Gastric stomach
18 chr9:100126400-100137800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr9:100126600-100141600 Weak transcription Primary B cells from peripheral blood blood
20 chr9:100126600-100148400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr9:100127000-100148600 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr9:100128800-100132600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr9:100129000-100132400 Weak transcription Brain Angular Gyrus brain
24 chr9:100129000-100132400 Weak transcription Brain Cingulate Gyrus brain
25 chr9:100129000-100134800 Weak transcription Spleen Spleen
26 chr9:100129000-100137200 Weak transcription Aorta Aorta
27 chr9:100129000-100137800 Weak transcription Pancreas Pancrea
28 chr9:100129000-100138200 Weak transcription Brain Substantia Nigra brain
29 chr9:100129000-100144400 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr9:100129200-100132400 Weak transcription Right Ventricle heart
31 chr9:100129200-100132400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr9:100129200-100132600 Weak transcription Brain Hippocampus Middle brain
33 chr9:100129200-100137200 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr9:100129200-100137600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr9:100129600-100138600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr9:100130000-100133200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr9:100130200-100132600 ZNF genes & repeats Fetal Muscle Leg muscle
38 chr9:100130600-100132800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr9:100131000-100132600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
40 chr9:100131400-100132600 ZNF genes & repeats Primary hematopoietic stem cells blood
41 chr9:100131400-100132600 ZNF genes & repeats Fetal Lung lung
42 chr9:100131400-100132800 ZNF genes & repeats H1 Cell Line embryonic stem cell
43 chr9:100131400-100133000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
44 chr9:100131600-100132400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
45 chr9:100131600-100132400 Weak transcription Adipose Nuclei Adipose
46 chr9:100131600-100132600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
47 chr9:100131600-100132800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr9:100131600-100132800 ZNF genes & repeats Fetal Stomach stomach
49 chr9:100131600-100135000 Weak transcription Duodenum Mucosa Duodenum
50 chr9:100131800-100132400 ZNF genes & repeats Fetal Intestine Small intestine

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Last update: Aug 31, 2015