The 2.0 version of rSNPBase

Variant report

Variant rs373894415
Chromosome Location chr19:38600816-38600817
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38551200-38613800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr19:38567600-38605400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr19:38573600-38610000 Strong transcription Fetal Intestine Large intestine
4 chr19:38581600-38610000 Weak transcription Psoas Muscle Psoas
5 chr19:38584800-38602400 Weak transcription Fetal Brain Male brain
6 chr19:38584800-38602400 Weak transcription Fetal Heart heart
7 chr19:38587000-38605400 Strong transcription Primary B cells from peripheral blood blood
8 chr19:38587200-38603200 Strong transcription Primary B cells from cord blood blood
9 chr19:38587200-38613600 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr19:38587400-38613400 Strong transcription Duodenum Mucosa Duodenum
11 chr19:38588600-38604000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr19:38588800-38606600 Strong transcription Liver Liver
13 chr19:38589200-38606800 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr19:38590200-38605200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
15 chr19:38590200-38605800 Strong transcription Adipose Nuclei Adipose
16 chr19:38590200-38606600 Strong transcription Sigmoid Colon Sigmoid Colon
17 chr19:38590200-38606600 Strong transcription Stomach Smooth Muscle stomach
18 chr19:38590200-38611000 Strong transcription Duodenum Smooth Muscle Duodenum
19 chr19:38590400-38606400 Strong transcription Fetal Brain Female brain
20 chr19:38590400-38609800 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr19:38590800-38602800 Strong transcription Spleen Spleen
22 chr19:38590800-38603600 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr19:38590800-38603800 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr19:38590800-38606600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr19:38590800-38608800 Strong transcription Fetal Intestine Small intestine
26 chr19:38591000-38601800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr19:38591000-38605000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr19:38591200-38605400 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr19:38591200-38605400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr19:38591200-38605800 Strong transcription Primary neutrophils fromperipheralblood blood
31 chr19:38591400-38603600 Strong transcription Primary monocytes fromperipheralblood blood
32 chr19:38591400-38605400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr19:38591600-38602600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr19:38591800-38609000 Strong transcription Fetal Stomach stomach
35 chr19:38591800-38642800 Weak transcription Small Intestine intestine
36 chr19:38592600-38602000 Weak transcription Fetal Kidney kidney
37 chr19:38594000-38602000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr19:38594400-38606800 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr19:38594600-38602400 Strong transcription Lung lung
40 chr19:38594600-38606800 Strong transcription GM12878-XiMat blood
41 chr19:38594800-38603000 Strong transcription Primary T cells from cord blood blood
42 chr19:38595400-38603600 Strong transcription Primary T helper cells fromperipheralblood blood
43 chr19:38595800-38603000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr19:38595800-38605000 Strong transcription Fetal Muscle Trunk muscle
45 chr19:38595800-38605800 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr19:38595800-38606200 Strong transcription Ovary ovary
47 chr19:38595800-38606600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr19:38596000-38602400 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr19:38596000-38603000 Strong transcription Brain Anterior Caudate brain
50 chr19:38596000-38603000 Strong transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015