Variant report

Variant	rs374008969
Chromosome Location	chr11:17204216-17204217
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:17201544..17204843-chr11:17207859..17210741,3	K562	blood:
2	chr11:17193774..17196751-chr11:17204153..17207102,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv469762	chr11:17170690-17320691	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
4	nsv482905	chr11:17170690-17320691	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
5	nsv553569	chr11:17201219-17211182	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv553570	chr11:17203765-17210885	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17156600-17219200	Weak transcription	HSMMtube	muscle
2	chr11:17158000-17215600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr11:17165200-17215200	Weak transcription	Rectal Smooth Muscle	rectum
4	chr11:17167400-17204400	Weak transcription	Thymus	Thymus
5	chr11:17167400-17212600	Weak transcription	Stomach Smooth Muscle	stomach
6	chr11:17167400-17228000	Weak transcription	Fetal Thymus	thymus
7	chr11:17172600-17214600	Weak transcription	Fetal Brain Female	brain
8	chr11:17184800-17228800	Weak transcription	Esophagus	oesophagus
9	chr11:17185800-17207400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr11:17185800-17212800	Weak transcription	Pancreas	Pancrea
11	chr11:17187000-17212600	Weak transcription	Brain Hippocampus Middle	brain
12	chr11:17187000-17228000	Weak transcription	Colonic Mucosa	Colon
13	chr11:17187200-17207200	Weak transcription	K562	blood
14	chr11:17187200-17210000	Weak transcription	Psoas Muscle	Psoas
15	chr11:17187200-17210000	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr11:17187200-17212600	Weak transcription	Rectal Mucosa Donor 31	rectum
17	chr11:17187200-17214000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr11:17187200-17214200	Weak transcription	Right Ventricle	heart
19	chr11:17187200-17226800	Weak transcription	Small Intestine	intestine
20	chr11:17191000-17207600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr11:17191000-17210000	Weak transcription	Rectal Mucosa Donor 29	rectum
22	chr11:17191000-17210200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr11:17191000-17220600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr11:17191200-17204400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr11:17191200-17204800	Weak transcription	Primary T cells from cord blood	blood
26	chr11:17191200-17208600	Weak transcription	GM12878-XiMat	blood
27	chr11:17191200-17209800	Weak transcription	Fetal Muscle Leg	muscle
28	chr11:17191200-17210000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr11:17191200-17210000	Weak transcription	Fetal Muscle Trunk	muscle
30	chr11:17191200-17212200	Weak transcription	Primary hematopoietic stem cells	blood
31	chr11:17191200-17212400	Weak transcription	Primary B cells from peripheral blood	blood
32	chr11:17191200-17212600	Weak transcription	Duodenum Mucosa	Duodenum
33	chr11:17191200-17213000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr11:17191200-17213000	Weak transcription	Dnd41	blood
35	chr11:17191200-17227800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
36	chr11:17191400-17206600	Weak transcription	Primary B cells from cord blood	blood
37	chr11:17191400-17212800	Weak transcription	Primary T cells fromperipheralblood	blood
38	chr11:17191400-17213000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr11:17191400-17214400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
40	chr11:17191600-17212200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr11:17191800-17212400	Weak transcription	HUES64 Cell Line	embryonic stem cell
42	chr11:17191800-17212800	Weak transcription	Fetal Kidney	kidney
43	chr11:17192000-17214400	Weak transcription	Pancreatic Islets	Pancreatic Islet
44	chr11:17192400-17214400	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr11:17192400-17217800	Weak transcription	Stomach Mucosa	stomach
46	chr11:17193200-17212400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr11:17193400-17204400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr11:17193800-17213000	Weak transcription	NH-A	brain
49	chr11:17194000-17209800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
50	chr11:17194000-17210200	Weak transcription	H1 Cell Line	embryonic stem cell

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