The 2.0 version of rSNPBase

Variant report

Variant rs374052449
Chromosome Location chr12:103888557-103888558
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:103886400-103888800 Enhancers NHEK skin
2 chr12:103886400-103889200 Enhancers HMEC breast
3 chr12:103886600-103888800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:103887400-103889400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr12:103887800-103888800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr12:103887800-103888800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr12:103887800-103889000 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr12:103888000-103888600 Enhancers Primary T helper cells fromperipheralblood blood
9 chr12:103888000-103888800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr12:103888000-103888800 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr12:103888000-103889000 Flanking Active TSS Dnd41 blood
12 chr12:103888200-103888600 Enhancers Primary B cells from peripheral blood blood
13 chr12:103888200-103888600 Flanking Active TSS Primary T cells from cord blood blood
14 chr12:103888200-103888600 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr12:103888200-103888800 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr12:103888200-103888800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
17 chr12:103888200-103888800 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
18 chr12:103888200-103889000 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr12:103888200-103889000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
20 chr12:103888200-103889000 Flanking Active TSS Fetal Thymus thymus
21 chr12:103888200-103889600 Active TSS Thymus Thymus
22 chr12:103888400-103888600 Active TSS H1 Cell Line embryonic stem cell
23 chr12:103888400-103888600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
24 chr12:103888400-103888600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
25 chr12:103888400-103888600 Enhancers Primary T cells fromperipheralblood blood
26 chr12:103888400-103888600 Enhancers Primary T helper cells PMA-I stimulated --
27 chr12:103888400-103888600 Flanking Active TSS Brain Germinal Matrix brain
28 chr12:103888400-103888800 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr12:103888400-103888800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
30 chr12:103888400-103888800 Bivalent Enhancer Primary B cells from cord blood blood
31 chr12:103888400-103888800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
32 chr12:103888400-103888800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr12:103888400-103888800 Enhancers GM12878-XiMat blood
34 chr12:103888400-103889000 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
35 chr12:103888400-103889000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
36 chr12:103888400-103889000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr12:103888400-103889000 Flanking Active TSS Fetal Brain Female brain
38 chr12:103888400-103889200 Enhancers Fetal Brain Male brain
39 chr12:103888400-103889800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
40 chr12:103888400-103890000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
41 chr12:103888400-103890200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
42 chr12:103888400-103890200 Active TSS H9 Cell Line embryonic stem cell
43 chr12:103888400-103890200 Active TSS Brain Angular Gyrus brain

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Last update: Aug 31, 2015