Variant report
| Variant | rs3741801 |
|---|---|
| Chromosome Location | chr12:12483318-12483319 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12466000-12484600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 2 | chr12:12467000-12484400 | Weak transcription | Small Intestine | intestine |
| 3 | chr12:12473200-12485200 | Weak transcription | HSMMtube | muscle |
| 4 | chr12:12473200-12501600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 5 | chr12:12473400-12484200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr12:12473600-12485200 | Weak transcription | NH-A | brain |
| 7 | chr12:12473600-12493200 | Weak transcription | Fetal Brain Female | brain |
| 8 | chr12:12473600-12502000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 9 | chr12:12473800-12484600 | Weak transcription | Lung | lung |
| 10 | chr12:12473800-12486200 | Weak transcription | Colonic Mucosa | Colon |
| 11 | chr12:12473800-12487600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 12 | chr12:12473800-12491800 | Weak transcription | Left Ventricle | heart |
| 13 | chr12:12473800-12502400 | Weak transcription | NHLF | lung |
| 14 | chr12:12474000-12484400 | Weak transcription | Pancreas | Pancrea |
| 15 | chr12:12474000-12489200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 16 | chr12:12474200-12486600 | Weak transcription | Brain Substantia Nigra | brain |
| 17 | chr12:12476000-12484200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 18 | chr12:12476000-12486400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 19 | chr12:12477000-12487600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 20 | chr12:12477200-12486200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 21 | chr12:12477200-12491800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr12:12480400-12484600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 23 | chr12:12480400-12487400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr12:12480400-12490800 | Weak transcription | Right Atrium | heart |
| 25 | chr12:12480400-12502400 | Weak transcription | Right Ventricle | heart |
| 26 | chr12:12480600-12483400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 27 | chr12:12480800-12486400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 28 | chr12:12480800-12486600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 29 | chr12:12481000-12484200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 30 | chr12:12481000-12484200 | Weak transcription | Fetal Kidney | kidney |
| 31 | chr12:12481000-12484200 | Weak transcription | Fetal Lung | lung |
| 32 | chr12:12481000-12484400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 33 | chr12:12481000-12484800 | Weak transcription | Brain Angular Gyrus | brain |
| 34 | chr12:12481000-12486200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 35 | chr12:12481000-12486400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 36 | chr12:12481000-12486400 | Weak transcription | Primary T cells from cord blood | blood |
| 37 | chr12:12481000-12486400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr12:12481000-12486400 | Weak transcription | Dnd41 | blood |
| 39 | chr12:12481000-12486400 | Weak transcription | GM12878-XiMat | blood |
| 40 | chr12:12481000-12486600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 41 | chr12:12481000-12487400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 42 | chr12:12481200-12485000 | Weak transcription | HUVEC | blood vessel |
| 43 | chr12:12481200-12486400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 44 | chr12:12481200-12486400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr12:12481200-12486600 | Weak transcription | HepG2 | liver |
| 46 | chr12:12481200-12487400 | Weak transcription | A549 | lung |
| 47 | chr12:12481200-12491000 | Weak transcription | Hela-S3 | cervix |
| 48 | chr12:12481200-12495400 | Weak transcription | Colon Smooth Muscle | Colon |
| 49 | chr12:12481200-12502200 | Weak transcription | Fetal Heart | heart |
| 50 | chr12:12481400-12485000 | Weak transcription | HMEC | breast |
