Variant report

Variant	rs374219604
Chromosome Location	chr4:160656918-160656919
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015469	chr4:160389277-160841619	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv537316	chr4:160389277-160841619	Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv595813	chr4:160574450-160665365	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv4574	chr4:160652259-160686024	Enhancers ZNF genes & repeats Weak transcription Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160656200-160657000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr4:160656200-160658400	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr4:160656400-160658000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:160656600-160658000	Enhancers	H1 Cell Line	embryonic stem cell
5	chr4:160656600-160658200	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr4:160656600-160658200	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr4:160656800-160657000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr4:160656800-160657400	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr4:160656800-160657400	Enhancers	Fetal Kidney	kidney
10	chr4:160656800-160657800	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr4:160656800-160658000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr4:160656800-160658000	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr4:160656800-160658200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr4:160656800-160658200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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