Variant report

Variant	rs374283934
Chromosome Location	chr14:81181046-81181047
allele	-/ACTA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv565290	chr14:81085129-81230117	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1035295	chr14:81180999-81236636	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv2494457	chr14:81181043-81181046	Flanking Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
5	esv2233908	chr14:81181045-81181049	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81167600-81181400	Weak transcription	Fetal Thymus	thymus
2	chr14:81168400-81184200	Weak transcription	Thymus	Thymus
3	chr14:81172400-81185200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr14:81172600-81185200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr14:81178800-81182200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr14:81179200-81186200	Enhancers	Dnd41	blood
7	chr14:81180200-81181600	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr14:81180200-81181600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr14:81180600-81181200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr14:81180600-81181400	Enhancers	Primary hematopoietic stem cells	blood
11	chr14:81181000-81181400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links