The 2.0 version of rSNPBase

Variant report

Variant rs374320124
Chromosome Location chr1:166914583-166914584
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:166891000-166916400 Weak transcription Stomach Smooth Muscle stomach
2 chr1:166905800-166915200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:166912800-166915400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr1:166912800-166915400 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr1:166912800-166915400 Enhancers Dnd41 blood
6 chr1:166912800-166916000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:166913000-166916200 Enhancers Brain Germinal Matrix brain
8 chr1:166913000-166916400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:166913000-166916400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:166913000-166922200 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:166913400-166914600 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr1:166913400-166915200 Enhancers Primary hematopoietic stem cells blood
13 chr1:166913400-166915200 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr1:166913400-166915200 Enhancers Fetal Thymus thymus
15 chr1:166913400-166915400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:166913400-166922000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:166913600-166914600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:166913600-166914600 Enhancers HMEC breast
19 chr1:166913600-166914800 Enhancers Primary T helper cells PMA-I stimulated --
20 chr1:166913600-166915200 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr1:166913800-166914600 Flanking Active TSS Primary T cells from cord blood blood
22 chr1:166913800-166914600 Enhancers Thymus Thymus
23 chr1:166913800-166916400 Enhancers Brain Angular Gyrus brain
24 chr1:166914000-166915000 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr1:166914000-166915800 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr1:166914000-166916000 Enhancers Brain Inferior Temporal Lobe brain
27 chr1:166914000-166916400 Enhancers Brain Anterior Caudate brain
28 chr1:166914000-166916400 Enhancers Brain Hippocampus Middle brain
29 chr1:166914000-166916400 Enhancers Brain Substantia Nigra brain
30 chr1:166914000-166923000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:166914200-166915000 Weak transcription Fetal Brain Female brain
32 chr1:166914200-166915000 Enhancers HSMMtube muscle
33 chr1:166914200-166915200 Enhancers HSMM muscle
34 chr1:166914200-166916200 Bivalent Enhancer NH-A brain
35 chr1:166914200-166916400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:166914200-166916600 Weak transcription Esophagus oesophagus
37 chr1:166914200-166916600 Weak transcription Right Atrium heart
38 chr1:166914400-166914600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:166914400-166914600 Enhancers Fetal Heart heart
40 chr1:166914400-166914800 Weak transcription Brain Cingulate Gyrus brain
41 chr1:166914400-166915800 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015