Variant report

Variant	rs374378485
Chromosome Location	chr5:151476241-151476242
allele	-/TCATTAAAGC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020899	chr5:151412785-151516788	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv508384	chr5:151438582-151487326	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2760935	chr5:151463117-151586051	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv883039	chr5:151471642-151540888	Enhancers Weak transcription Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv883040	chr5:151471642-151596273	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	esv3513261	chr5:151476113-151476500	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3397927	chr5:151476135-151476501	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3513262	chr5:151476157-151476403	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3470046	chr5:151476176-151476391	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3382433	chr5:151476197-151476386	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv4594	chr5:151476209-151476450	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3470047	chr5:151476233-151476375	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3513264	chr5:151476233-151476375	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151475200-151476400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr5:151475600-151477000	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr5:151475600-151477400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr5:151475600-151477800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr5:151475800-151476600	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr5:151475800-151477200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr5:151475800-151477200	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr5:151476000-151477200	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr5:151476000-151477200	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr5:151476200-151476600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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