The 2.0 version of rSNPBase

Variant report

Variant rs374404250
Chromosome Location chr4:152583867-152583868
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:152563800-152625200 Weak transcription Hela-S3 cervix
2 chr4:152564200-152595200 Weak transcription Aorta Aorta
3 chr4:152567400-152608600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr4:152567800-152609000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr4:152571200-152584200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr4:152571200-152584200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr4:152571600-152595000 Weak transcription HepG2 liver
8 chr4:152577200-152585000 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr4:152578400-152595200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr4:152579200-152584000 Weak transcription Colonic Mucosa Colon
11 chr4:152579200-152597400 Weak transcription Liver Liver
12 chr4:152579600-152584400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr4:152579600-152585000 Weak transcription Gastric stomach
14 chr4:152579600-152587600 Weak transcription NHEK skin
15 chr4:152579600-152592200 Weak transcription Right Ventricle heart
16 chr4:152579800-152584000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr4:152579800-152585000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:152579800-152592800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr4:152580000-152595200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr4:152580200-152596000 Weak transcription Placenta Amnion Placenta Amnion
21 chr4:152580800-152595800 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr4:152580800-152596800 Weak transcription Primary T cells from cord blood blood
23 chr4:152581000-152592000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr4:152581200-152587600 Weak transcription Dnd41 blood
25 chr4:152581200-152602800 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr4:152581200-152608400 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr4:152581400-152584400 Weak transcription Left Ventricle heart
28 chr4:152581400-152585000 Weak transcription Fetal Thymus thymus
29 chr4:152581400-152585000 Weak transcription HSMMtube muscle
30 chr4:152581400-152587600 Weak transcription Fetal Muscle Leg muscle
31 chr4:152581600-152595000 Weak transcription Stomach Smooth Muscle stomach
32 chr4:152581800-152586600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr4:152581800-152595600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr4:152582200-152584400 Weak transcription Fetal Intestine Small intestine
35 chr4:152582400-152588000 Weak transcription Psoas Muscle Psoas
36 chr4:152582400-152588200 Weak transcription Fetal Kidney kidney
37 chr4:152582400-152592600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr4:152582400-152595000 Weak transcription Lung lung
39 chr4:152582400-152595800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr4:152583000-152584000 Enhancers Fetal Brain Male brain
41 chr4:152583000-152588000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:152583000-152591800 Weak transcription Adipose Nuclei Adipose
43 chr4:152583200-152584600 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr4:152583200-152584800 Strong transcription Fetal Intestine Large intestine
45 chr4:152583200-152585800 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr4:152583200-152586000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr4:152583200-152586600 Weak transcription Fetal Heart heart
48 chr4:152583200-152586800 Strong transcription Pancreas Pancrea
49 chr4:152583200-152587200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr4:152583200-152588800 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015