Variant report

Variant rs3747001
Chromosome Location chr21:47581734-47581735
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47573400-47590200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr21:47573600-47581800 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr21:47573600-47583200 Weak transcription Brain Substantia Nigra brain
4 chr21:47573600-47589600 Weak transcription Primary hematopoietic stem cells blood
5 chr21:47573600-47600200 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr21:47573600-47602000 Weak transcription Gastric stomach
7 chr21:47573800-47581800 Weak transcription Esophagus oesophagus
8 chr21:47573800-47583000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr21:47573800-47585400 Weak transcription Brain Angular Gyrus brain
10 chr21:47573800-47585600 Weak transcription Muscle Satellite Cultured Cells --
11 chr21:47573800-47588000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr21:47573800-47590800 Weak transcription Brain Cingulate Gyrus brain
13 chr21:47573800-47591400 Weak transcription Left Ventricle heart
14 chr21:47573800-47592000 Weak transcription Right Ventricle heart
15 chr21:47573800-47593400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr21:47573800-47593400 Weak transcription Brain Anterior Caudate brain
17 chr21:47573800-47602200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr21:47573800-47603800 Weak transcription Right Atrium heart
19 chr21:47574000-47590400 Weak transcription Placenta Placenta
20 chr21:47574200-47590800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr21:47575800-47583800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr21:47577800-47582600 Strong transcription Fetal Intestine Small intestine
23 chr21:47579200-47582000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr21:47579400-47582200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
25 chr21:47579600-47582000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr21:47579600-47582000 Strong transcription Ovary ovary
27 chr21:47579600-47582400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
28 chr21:47579800-47582400 ZNF genes & repeats H1 Cell Line embryonic stem cell
29 chr21:47580000-47583600 ZNF genes & repeats K562 blood
30 chr21:47580200-47582000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr21:47580200-47588000 Weak transcription Fetal Muscle Trunk muscle
32 chr21:47580600-47582000 Strong transcription iPS-15b Cell Line embryonic stem cell
33 chr21:47580800-47582000 ZNF genes & repeats H9 Cell Line embryonic stem cell
34 chr21:47580800-47582400 ZNF genes & repeats Thymus Thymus
35 chr21:47580800-47582800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
36 chr21:47581000-47581800 Genic enhancers Breast Myoepithelial Primary Cells Breast
37 chr21:47581000-47581800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
38 chr21:47581000-47582000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
39 chr21:47581000-47582200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
40 chr21:47581000-47582400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
41 chr21:47581000-47583000 ZNF genes & repeats Fetal Stomach stomach
42 chr21:47581200-47581800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr21:47581200-47582000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
44 chr21:47581200-47582000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
45 chr21:47581200-47582000 ZNF genes & repeats Colonic Mucosa Colon
46 chr21:47581200-47582200 Bivalent Enhancer Fetal Muscle Leg muscle
47 chr21:47581200-47582400 Bivalent/Poised TSS Fetal Brain Female brain
48 chr21:47581400-47582400 Bivalent Enhancer Placenta Amnion Placenta Amnion
49 chr21:47581400-47585400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr21:47581400-47602800 Weak transcription Skeletal Muscle Male skeletal muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links