Variant report

Variant	rs374734631
Chromosome Location	chr2:152490387-152490388
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934136	chr2:152308156-152664443	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv1005746	chr2:152361972-153059840	Strong transcription Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
3	nsv535984	chr2:152361972-153059840	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
4	nsv2974	chr2:152401495-152499455	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv469804	chr2:152404429-152570882	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv482520	chr2:152404429-152570882	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv979135	chr2:152490028-152490528	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:152465400-152491400	Weak transcription	Primary B cells from cord blood	blood
2	chr2:152467800-152491400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr2:152472000-152491800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr2:152482000-152502400	Strong transcription	Fetal Muscle Leg	muscle
5	chr2:152482000-152507600	Strong transcription	Fetal Muscle Trunk	muscle
6	chr2:152482800-152493800	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr2:152482800-152494800	Weak transcription	Gastric	stomach
8	chr2:152485400-152492400	Strong transcription	Skeletal Muscle Male	skeletal muscle
9	chr2:152488600-152499400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr2:152489200-152492000	Strong transcription	Psoas Muscle	Psoas
11	chr2:152489400-152490400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
12	chr2:152489600-152490400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
13	chr2:152489600-152490400	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr2:152489600-152490400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
15	chr2:152489600-152505200	Strong transcription	HSMMtube	muscle
16	chr2:152489800-152490400	Enhancers	Primary T helper cells PMA-I stimulated	--
17	chr2:152490000-152490400	Enhancers	Primary T cells fromperipheralblood	blood
18	chr2:152490000-152492600	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr2:152490200-152490800	Genic enhancers	Skeletal Muscle Female	skeletal muscle
20	chr2:152490200-152492600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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