The 2.0 version of rSNPBase

Variant report

Variant rs374752074
Chromosome Location chr15:38856262-38856263
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:38853600-38856800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
2 chr15:38853600-38857600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
3 chr15:38855000-38857000 Active TSS Duodenum Mucosa Duodenum
4 chr15:38855000-38857800 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
5 chr15:38855200-38856400 Flanking Active TSS Primary B cells from cord blood blood
6 chr15:38855200-38857200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
7 chr15:38855200-38857200 Active TSS Primary T helper naive cells from peripheral blood blood
8 chr15:38855400-38857400 Active TSS Primary T killer memory cells from peripheral blood blood
9 chr15:38855400-38857600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr15:38855600-38856400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
11 chr15:38855600-38856400 Flanking Active TSS Primary B cells from peripheral blood blood
12 chr15:38855600-38856400 Flanking Active TSS Dnd41 blood
13 chr15:38855600-38857200 Active TSS Primary T cells from cord blood blood
14 chr15:38855600-38857200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
15 chr15:38855600-38857800 Active TSS Pancreatic Islets Pancreatic Islet
16 chr15:38855800-38856400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr15:38855800-38856400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr15:38855800-38856400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr15:38855800-38856400 Flanking Active TSS Brain Angular Gyrus brain
20 chr15:38855800-38856400 Flanking Active TSS Brain Cingulate Gyrus brain
21 chr15:38855800-38856400 Flanking Active TSS Brain Hippocampus Middle brain
22 chr15:38855800-38856400 Flanking Active TSS Brain Inferior Temporal Lobe brain
23 chr15:38855800-38856400 Flanking Active TSS Esophagus oesophagus
24 chr15:38855800-38856400 Bivalent Enhancer Stomach Mucosa stomach
25 chr15:38855800-38856600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
26 chr15:38855800-38856800 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
27 chr15:38855800-38857000 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
28 chr15:38855800-38857200 Active TSS Small Intestine intestine
29 chr15:38855800-38857600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr15:38855800-38857600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr15:38856000-38856400 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
32 chr15:38856000-38856400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
33 chr15:38856000-38856400 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr15:38856000-38856400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
35 chr15:38856000-38856400 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
36 chr15:38856000-38856400 Flanking Active TSS Brain Anterior Caudate brain
37 chr15:38856000-38856400 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
38 chr15:38856000-38856400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
39 chr15:38856000-38856400 Flanking Active TSS Fetal Brain Female brain
40 chr15:38856000-38856400 Enhancers Fetal Heart heart
41 chr15:38856000-38856400 Bivalent Enhancer Fetal Muscle Trunk muscle
42 chr15:38856000-38856400 Enhancers Left Ventricle heart
43 chr15:38856000-38856400 Flanking Active TSS Pancreas Pancrea
44 chr15:38856000-38856400 Enhancers Placenta Amnion Placenta Amnion
45 chr15:38856000-38856400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
46 chr15:38856000-38856400 Enhancers Spleen Spleen
47 chr15:38856000-38856600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr15:38856000-38856600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
49 chr15:38856000-38856800 Flanking Active TSS Liver Liver
50 chr15:38856000-38857000 Bivalent/Poised TSS Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015